Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq20645 89.7 5e-13 >seq20645 Length=266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 144046 GCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATT 144105 ||||| || ||| |||| ||||| || |||||||||| | | |||| || || Sbjct 23 GCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATA 82 Query 144106 GAAGCAGAAGCCTTATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACGCATGAA 144165 || | | | | ||||| || | || ||| || ||||| | |||||||| Sbjct 83 GATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAG 142 Query 144166 CTAAACTGCCGAGTTGGAGTACGGCAACCAGCCATAATAGGGGTTGGCAGTGAAATCTGT 144225 |||||||| ||||| || ||||| || ||||| ||||| |||||||||||||||| Sbjct 143 CTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTTA 202 Query 144226 CGAGTAGATACTGCTTCATAAAAA 144249 ||| ||||| || || |||||| Sbjct 203 AAAGTCGATACCGCGTCGTAAAAA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527628203999320