Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq20645 84.2 2e-11 >seq20645 Length=266 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 143451 TCACCAGCTTCAATAACAACACAAGAGCTAAACTGACGAGTCGGTGTACGAGCCCCGGCC 143510 || ||| |||||| | || || |||||||||||||||||||| ||||| | || ||| Sbjct 116 TCGCCACATTCAATCAGTACGCATGAGCTAAACTGACGAGTCGGCGTACGCACTCCCGCC 175 Query 143511 ATAATTGGAGTAGGCAAAGAAATTTGACGAGTAGATACGGCGTCATAAAAA 143561 || || || || |||| ||||| | | ||| ||||| ||||| |||||| Sbjct 176 ATGATAGGCGTTGGCAGTGAAATCTTAAAAGTCGATACCGCGTCGTAAAAA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544714812585480