Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq20645 91.5 2e-13 >seq20645 Length=266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 58587 GCACGGATAGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATT 58646 ||||||||| ||| || | |||||||||||| || | ||||||||| ||||| Sbjct 23 GCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGATA 82 Query 58647 GCGGTGCCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAG 58706 | | | || || | ||| |||| | | || ||| | | ||||| || |||||| Sbjct 83 GATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGAG 142 Query 58707 CTGAACTGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAG 58756 || |||||||| || | |||||||| || ||||||||||| ||||| || Sbjct 143 CTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518547544737600