Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq752 232 8e-56 seq326 197 2e-45 seq26 149 7e-31 seq433 120 3e-22 seq174 109 6e-19 >seq752 Length=11106 Score = 232 bits (256), Expect = 8e-56 Identities = 1127/1763 (64%), Gaps = 75/1763 (4%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| |||| |||| |||||||||||||||||||| ||| ||||||||| | |||| Sbjct 3794 GCCTGCGTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCAGCAAAGTGC 3853 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 ||||| ||| ||| | | || || | || |||| | ||| || ||||| ||||| Sbjct 3854 ATAGAGGTGATCTTGCCCATAGTAGGATCCTTCATGTGAACGTTGAGCGACTGGGACTGG 3913 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTCCCA 80210 ||| || || || ||||| || ||||| | |||| |||| | | | ||| ||||| Sbjct 3914 TCGATAAAGGCACCGCGATCGGCGGCCATCTGGATAACATGACGCT-GAGAAATCTCCCA 3972 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267 || || ||| | |||| || | || | || || | | | | | | || Sbjct 3973 AACAGTCTTATAGAGAGCCTT--GATG-TCGGCGGGGATATTGGGGATGTTCTGAATGGA 4029 Query 80268 ACCGTCCTTTACAATTT---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324 ||| | || |||| | || |||| || | ||||| ||| | | | || Sbjct 4030 ACCATTCTCGGCAATGATGCGGTTCTTCATGGCATCAGACCAGAGACCCATGTCGACGAG 4089 Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381 ||| || | || | | ||| | | || | || || || | | || ||| | Sbjct 4090 ATCCTTGAGGAGCCAGGGGTTGACGACCTGGA---ATTCACCAGCCAAGACACGGCGCTG 4146 Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441 || | ||| | ||||| |||||||| ||| ||||| || || || || | || Sbjct 4147 GTAAATGTTGGACGTGTATGGCTCAAAGCACTCATTGTTACCCAGAATTTGCGAGGTCGA 4206 Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501 || || ||||| || ||| || || || || || | ||||||| |||||| | ||| Sbjct 4207 TGCGGTGGGCATGGGAGCGAGCAGCAACGAGTTGCGAATACCGTGCTCCTTGATCTGCTC 4266 Query 80502 GCGCAAATCTGACCAAAAATCA--ACCCC-AACGCTGTGACC--CCACATGTCGTGCTGC 80556 || | ||| || | || || | || ||| |||| |||||||||| || Sbjct 4267 CTTCAGA-CTGTCCCACTCCCATAACTCAGAAGGCT-TGACATTCCACATGTCGAATTGA 4324 Query 80557 AAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCC 80616 | || || ||||| || ||||| ||| ||| || ||| ||||| | | |||||| Sbjct 4325 AGAATACCTTCCGAGGCGGGAGAGCCCTTGAAGGTAGAGTAGGGGCCTTGCTCTTTGGCC 4384 Query 80617 AGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACA 80676 |||||| || | | ||||| ||||| || ||| ||| |||| |||||| | Sbjct 4385 AGCTCAAGAGAGGCTGTCAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGC 4444 Query 80677 CCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACA-CGTCAGCCAGGCC 80735 | || |||| || ||||| | || || || | || ||| | ||||||| || || Sbjct 4445 TCACGGGCCTCGGGAGACTCGAAGGGCATGCGCA-GAGCAAGAAAAGCGTCAGCAAGACC 4503 Query 80736 CTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTG 80794 |||||| || | |||| || || || ||| |||| | | || |||||| ||| | Sbjct 4504 CTGAACACCAACACCGATGGGTCGATGTCGCATGTTGCTGTTGC-GAGCCTCCTCAATGG 4562 Query 80795 GGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCAT 80854 ||||| ||| || |||| ||| ||||| || || || | || || || | Sbjct 4563 GGTAATGGTTGACGTCAATGATCTTGTTGAGGTTACGGACGACCACTTGAGTGACCTCGT 4622 Query 80855 GAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC----------ACAAATGCCGGAAGGCTC 80904 | || ||||| |||||| | || ||||| || || || || ||| Sbjct 4623 GGAGCTTCTGGAAGTCGTAGCGG----CCTTCTTTGTAGTCGACGAAGGCAGGCAGGGCA 4678 Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCA---GCATCTGTAAACTCGACGATTTCC 80961 || || |||| ||||| || || ||||| ||| ||| | || |||| | ||| ||| Sbjct 4679 AGAGAGGCCAAGTTGCAAACAGCAACCTCATCAGGGGCA-CAGT--ACTCAATGATCTCC 4735 Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAA 81021 ||||||| || || ||| || |||||||| |||||||| ||| |||||| Sbjct 4736 GTGCACAGGTTGGAGCTGCGAATGGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGTTGCAG 4795 Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081 || |||||||| ||| | ||| | || || ||| ||| |||| |||||||| || | Sbjct 4796 GCATCCTTGTACAGCATAAAGGGGTTGCCCGTTTCGGTCTGGGACTCGAGGATGGAGTAC 4855 Query 81082 CAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAA 81141 || | || | || | ||||||| ||| || | ||||||| |||| Sbjct 4856 CAGAGCTTCTGGGCACGAATAGTCTTGCGGCCACGGCCCTCACGCTCATACTTTTCGTAG 4915 Query 81142 GCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATC 81201 | || || | | || | |||| ||| | ||||||||||| || ||||| Sbjct 4916 AGAGCCTCAAATTCCTCGCCATAGCAATCAGCCAGGCCAGGGCACTCGTTGGGACACATG 4975 Query 81202 AGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCG 81261 ||| ||| || || || || || ||||||||| || |||||||| || || Sbjct 4976 AGGGTCCAATCCCCGTTCTTTTCGACGCGCTTCATGAAGAGATCTGGGATCCACAGAGCA 5035 Query 81262 GTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320 ||| |||||||| ||| || || || | ||| ||||| ||||| || ||||| Sbjct 5036 AGGAAGAGGTCGCGAGCA-CGATTTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGAAA 5094 Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC-GATCGAC-----CCCTTGCG 81374 ||| | | ||| || ||||| ||||| || || | ||| || || | |||| Sbjct 5095 GTCGAACACGTCTGCGTGCCAAGGCTCGAGGTAGATGGCAAATGCACCAGGTCGCTTGTT 5154 Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434 | || ||||||| ||||| | |||||| ||| || || || | ||| || ||||| Sbjct 5155 A---CCGCCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAT 5211 Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT 81494 || | || |||||| || || | || || || | || || | ||| | | Sbjct 5212 GCCGTTGGATGTACCGTTGGTGCCGGCAATGTAAGAGCCGGTAGCACGGA---TGC-GGT 5267 Query 81495 TGA-----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTC 81549 || ||| ||||| ||||| | | ||| || ||| ||||| || | || Sbjct 5268 GGACGTTCAAG-CCGATTCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTG 5326 Query 81550 TCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGA 81609 || || || || || ||||| || | |||||||| | | ||||||| |||| |||| Sbjct 5327 TCGTAGATGCCATCAATGCTGTCGTCCTTCATGTCGACTAGGAAACAGGAAGACAGCTGA 5386 Query 81610 GGGCTTTTTGAG---CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666 | | | | || || ||||| ||||| || | ||||| |||| | | Sbjct 5387 ---CACTGGGGGGTACCAGCGTTGAAGAGTGTAGGTGAGGCGTGGGTGAAGAGCTTGCTG 5443 Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCT 81726 ||||| |||| ||||| ||| ||||| ||||| ||| || |||||||| || Sbjct 5444 GACATGAGGTGGTAGGTCTCCAAAACGCGCTCAATATTGTCTCCCCAAATACCGACCGCA 5503 Query 81727 ACACGCATAAACATGTACTGGGG 81749 || ||||||| ||||| |||||| Sbjct 5504 ACGCGCATAATCATGTGCTGGGG 5526 >seq326 Length=20000 Score = 197 bits (218), Expect = 2e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct 13285 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATTACTCTCGAGGTCGAGTCGTCT 13226 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || |||||||| ||||||||||| || || |||||| Sbjct 13225 GATACCATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAG 13166 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||| | ||| || || || ||||| || Sbjct 13165 CAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGTCGCACTCTTGCTGACTACAAC 13106 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| || ||| | || || || ||||| Sbjct 13105 ATCCAGAAGGAGTCAACCCTTCACCTCGTCCTCCGCCTCCGAGGTGG 13059 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || ||||||||||| || | || || || || Sbjct 12756 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACATTGGAAGTCGAATCTTCG 12697 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | |||||||| ||||| |||||||| || ||||| || |||||| Sbjct 12696 GATACAATCGATAATGTAAAGGCTAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCAG 12637 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| |||||||||| || || | || ||||| || Sbjct 12636 CAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGAACTTTGGCCGACTACAAC 12577 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| ||| | ||| ||||||| || ||||| Sbjct 12576 ATTCAGAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTGCGGGGTGG 12530 Score = 161 bits (178), Expect = 1e-34 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||||||||| | || || ||||| || || |||||||| ||||| || | ||| | Sbjct 12974 TTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCG 12915 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 ||| | || | || |||||||| ||||| || |||||||| || |||||||| | | Sbjct 12914 ACAATGTCAAATCGAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAGCAGCGATTGA 12855 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | || ||||||||||| || || |||| ||||||||| || ||||| ||| |||| |||| Sbjct 12854 TCTTCGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTCGCCGACTACAATATCCAGAAGG 12795 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || || | || || || ||||| Sbjct 12794 AATCCACTCTTCACCTTGTACTCCGCCTCCGTGGTGG 12758 Score = 140 bits (154), Expect = 4e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || |||||||| || | || || || || | | Sbjct 12528 ATGCAAATTTTTGTCAAGACCTTGACTGGAAAGACTATCACCTTGGAAGTCGAATCTGCT 12469 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | | | | || | || |||||||| ||||||||||| ||||| |||||| Sbjct 12468 GATACCATCGACACTGTCAAATCCAAGATTCAGGATAAGGAGGGAATCCCTCCCGACCAG 12409 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || || || |||||||| || ||||| || || || | || || || ||| ||||| || Sbjct 12408 CAACGACTTATTTTTGCCGGAAAGCAGCTAGAAGACGGCCGCACGCTGAGC-GACTACAA 12350 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| |||||| ||| | ||||| || | ||||| || ||||| || Sbjct 12349 CATCCAGAAGGAAAGTACTTTGCATCTCGTGCTTCGTCTGCGTGGTGGTCA 12299 >seq26 Length=47302 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || || |||||||| || |||||||| ||||| Sbjct 12196 ATGCAGATTTTCGTCAAAACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCC 12137 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||||||||| ||||| || |||||| Sbjct 12136 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 12077 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||||||||| |||||||||| || ||||| ||||| || Sbjct 12076 CAACGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGTGCGACTACAAC 12017 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| || ||| | || |||| || || || || Sbjct 12016 ATCCAGAAGGAGAGCACCCTGCATTTGGTGCTGCGCCTGCGTGGCGG 11970 >seq433 Length=16792 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || |||||||| ||||| || | || Sbjct 5057 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 4998 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||||| ||||| || ||||||||||| ||||| || ||||||||||| | Sbjct 4997 GACAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATTCCCCCTGACCAGCAGCGATTG 4938 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| ||||| ||||| || ||||| | ||| ||||| ||||| || | || ||| Sbjct 4937 ATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGAACCCTGTGCGACTACAACATTCAGAAG 4878 Query 27595 G 27595 | Sbjct 4877 G 4877 >seq174 Length=26573 Score = 109 bits (120), Expect = 6e-19 Identities = 298/451 (66%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 31954 GATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTG 32013 |||| || ||| ||||| || ||| |||||| | || ||| ||||| ||||| Sbjct 16784 GATAACATGCGTTCCATCCCGTCCGTCATTGACGGCTTGAAACCTGGTCAGCGAAAGGTT 16843 Query 32014 ATATACGCCTGCCTCAAGAAGAACCTG-TCGAGTGACATGAAGGTGGCGCAGCTGTCGGG 32072 | || || ||| ||||| || ||| || || || | ||||| | | | || | || Sbjct 16844 CTCTATGCTTGCTTCAAGCGAAATCTGGTCAAG-GATAAAAAGGTTGTGGAACTCGCTGG 16902 Query 32073 CTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGT 32132 || || | ||||| || || ||||||||||| ||||| ||||| || || ||| | Sbjct 16903 TTATGTCTCTGAGCAGACTGCATATCACCACGGTGAGGCCTCGCTGCAACAGACGATTAT 16962 Query 32133 CAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACA 32192 | | | || ||||| ||| | || | || || | || | || |||||| || | Sbjct 16963 CGGCTTGGCACAGAATTTTATTGGATCCAACAATATCAATATCCTGGAGCCAAGCGGTAA 17022 Query 32193 GTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG 32252 || || |||| ||||| ||||| |||||||| || | ||||| | ||||||||| Sbjct 17023 CTTCGGTTCCCGTCTCGCAGGTGGTTCCGATGCTGCTAGTCCTCGTTATACCTTCACCCG 17082 Query 32253 TCTCGCACC-TTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACA 32311 || ||||| |||| | | ||||| || ||| ||| || | |||||| | Sbjct 17083 CCTGGCACCTTTCGCCAAG-AAGATCTTTTCCCCCATGGATGAGCCCAGCCTCAAGCATC 17141 Query 32312 ATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCT 32371 | | |||||| | ||||| | || || | | | || ||| | |||| ||| | Sbjct 17142 AGTATGATGATGACAAGCGGATTGAACCAGAGGTTTATTCTCCTATTATTCCCATGGTTC 17201 Query 32372 TGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | || || ||||| || || |||||||| || Sbjct 17202 TTGTCAATGGTGCCGACGGTATCGGAACCGG 17232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570050459648560