Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq20645 109 6e-19 >seq20645 Length=266 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 128873 TGCACGAATCATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAAT 128932 |||||| || ||| || || ||||| ||||| || || | || | ||||||| || Sbjct 22 TGCACGGATACGACCGGCGTTGATACCGATACCAGCGCGTTGGCTCACGTATTTTACGAT 81 Query 128933 TGACGCAGCAGCTTCGTTAATTGAATTAAGACTATCACCGCCTTCAATAACCACGCATGA 128992 || | || | |||| || |||| | ||||| || | |||||| | |||||||| Sbjct 82 AGATGATGCTGTCGCGTTGATGGAATCCAAGCTATCGCCACATTCAATCAGTACGCATGA 141 Query 128993 ACTAAACTGACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTT 129052 ||||||||||| ||||| ||||| || || | ||| || || ||||||| ||||||||| Sbjct 142 GCTAAACTGACGAGTCGGCGTACGCACTCCCGCCATGATAGGCGTTGGCAGTGAAATCTT 201 Query 129053 TTTAGTAGAAACTGCATCATAGAAA 129077 ||| || || || || || ||| Sbjct 202 AAAAGTCGATACCGCGTCGTAAAAA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531831087504040