Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq26060 84.2 6e-12 >seq26060 Length=233 Score = 84.2 bits (92), Expect = 6e-12 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 30405 AAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGGAATTAACTGGATCA 30464 ||| ||||||||||| || | | || | || |||||||||| || | | | | Sbjct 231 AAATGGCGAAAGCCGGTCTGCGCGAACAGAACCGACTTTCTGGTGCAAATCGTTTGGACT 172 Query 30465 ATTCACAGGAGTAATTATGGCAAACACTGCCGAAGTAATCAATTTTCCTGTGCCTGACGT 30524 || ||||||||| |||| ||||||| ||| |||||||||| || |||| || | Sbjct 171 CTTTGCAGGAGTAAGTATGTCAAACACCGCCAAAGTAATCAAATTCCCTGCGCAGCAACC 112 Query 30525 GGCACCTAAGGAGCCGCGCGTGGCAGATCTCGATGATGGCTATACGCGCCTGGCAAATGA 30584 ||| | ||||| ||| |||| ||||| || |||||||| ||||| || || | Sbjct 111 GGCGCAGCAGGAGAATCGCATGGCCGATCTGGAAAATGGCTATCTTCGCCTTGCTAACCA 52 Query 30585 ACTTCTGGATGCCGTG 30600 ||| ||||||| || Sbjct 51 GATTCAGGATGCCCTG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130190003553012