Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15]
36,463 sequences; 36,098,533 total letters
Query= NC_028699.1
Length=40740
Score E
Sequences producing significant alignments: (Bits) Value
seq26060 84.2 6e-12
>seq26060
Length=233
Score = 84.2 bits (92), Expect = 6e-12
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 30405 AAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGGAATTAACTGGATCA 30464
||| ||||||||||| || | | || | || |||||||||| || | | | |
Sbjct 231 AAATGGCGAAAGCCGGTCTGCGCGAACAGAACCGACTTTCTGGTGCAAATCGTTTGGACT 172
Query 30465 ATTCACAGGAGTAATTATGGCAAACACTGCCGAAGTAATCAATTTTCCTGTGCCTGACGT 30524
|| ||||||||| |||| ||||||| ||| |||||||||| || |||| || |
Sbjct 171 CTTTGCAGGAGTAAGTATGTCAAACACCGCCAAAGTAATCAAATTCCCTGCGCAGCAACC 112
Query 30525 GGCACCTAAGGAGCCGCGCGTGGCAGATCTCGATGATGGCTATACGCGCCTGGCAAATGA 30584
||| | ||||| ||| |||| ||||| || |||||||| ||||| || || |
Sbjct 111 GGCGCAGCAGGAGAATCGCATGGCCGATCTGGAAAATGGCTATCTTCGCCTTGCTAACCA 52
Query 30585 ACTTCTGGATGCCGTG 30600
||| ||||||| ||
Sbjct 51 GATTCAGGATGCCCTG 36
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130190003553012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |