Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq248 394 8e-105 seq258 336 2e-87 seq39 116 3e-21 seq13 100 3e-16 seq864 86.0 6e-12 seq86 86.0 6e-12 >seq248 Length=42843 Score = 394 bits (436), Expect = 8e-105 Identities = 1212/1853 (65%), Gaps = 48/1853 (3%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| | || |||||||||||||| ||||||| |||||| | ||| || || || Sbjct 22674 GTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCAGCAAAGTGCATAGAG 22733 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || | | || | ||||| || |||| |||||| ||| |||||| Sbjct 22734 GTGATCTTGCCCATAGTAGGATCCTTCATGTGAACGTTGAGCGACTGGGACTGGTCGATA 22793 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCA-ATGTACGCATCGACATTTCCCATACGGT 22323 || || || |||||||||||||| | || | ||| |||| || || ||||| || || Sbjct 22794 AAAGCACCGCGATCGGCGGCCATCTGGATAACATG-ACGCTGAGAAATCTCCCAAACAGT 22852 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTA 22381 |||||| || | |||| || || || ||| | || |||| | ||| ||||| Sbjct 22853 CTTGTAGAGAGCCTTGATGTCGGCGGGGAT--ATTGGGAATGTTCTGAATGGAACCGTTC 22910 Query 22382 TTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441 | | ||||| || || || | ||| ||| | ||| || || | ||| ||| Sbjct 22911 TCGGCAATGATGCGGTTCTTCATGGCATCAGACCAAAGACCCATATCGACGAGATCCTTG 22970 Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501 | || |||| || || || || || || | |||||| ||||| |||||||||||| Sbjct 22971 AGGAGCCAGGGGTTGACGACCTGGAATTCACCAGCCAAGACACGGCGCTGGTAAATGTTG 23030 Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || || || | |||||||| ||||| || || | ||| || ||||| ||| Sbjct 23031 GACGTGTATGGCTCAAAGCACTCATTGTTACCCAGGATTTGCGAGGTAGAGGCGGTGGGC 23090 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGC 22618 || || || | ||| | |||||| | | |||||| |||| | | ||| || | Sbjct 23091 ATGGGAGCGAGCAGCAACGAGTTGCGAATATCGTGCTGCTTGA---TCTGCTCCTTCAAG 23147 Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACG 22678 | ||| ||||||| || || ||| | ||||| |||||| ||| | || | || Sbjct 23148 TTGTCCCACTCCCACAACTCAGAAGGCTTGACATT---CCACATGTCGAACTGAAGAACA 23204 Query 22679 CCG--CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTT 22736 || ||| || || ||| | | | || ||| || || | ||| || | Sbjct 23205 CCTTCCGAGGCG--GGAGAGCCCTTGAAGGTAGAGTAGGGGCCTTGCTCTTTGGCCAGCT 23262 Query 22737 CGCAGCTCGCCTC-CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC- 22794 | || | || || || ||| || || |||||||| |||| |||||| | || Sbjct 23263 CA-AGAGAGGCTGTCAGGGCAGCGTGGTAAATGGTCTCGAAAATTTGCTTGTTGAGCTCA 23321 Query 22795 --GGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAAC-GCGTCCGCCATACC 22851 ||| ||| || || || | ||||| |||| | || ||| ||||| || | ||| Sbjct 23322 CGGGCCTCGG-GAGACT--CGAAGGGCATGCGCAG-AGCAAGAAAAGCGTCGGCAAGACC 23377 Query 22852 CTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGC----CTCGGGCA 22907 |||||| || | |||||| ||||| | | || || || |||| ||| | Sbjct 23378 CTGAACACCAACACCGATGGGTCGATGTCGCATGTTG----CTGTTGCGAGCCTCCTCAA 23433 Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNN 22967 || || || |||||| | |||| | ||| | | || | || || | Sbjct 23434 TGGGGTAATGGTTGACATCGATGATCTTGTTGAGGTTACGGACGACCACTTGAGTCACCT 23493 Query 22968 NNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT-GTA--CAACAAACTTGTTGACGGCGA 23024 | |||||||| ||| || ||| | || || | ||| | Sbjct 23494 CGTGGAGCTTCTGGAAGTCGTAGCGGCCTTCTTTGTAGTCGACGAAGGCAGGCAGGGCAA 23553 Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084 ||||| | ||||| || || ||||| || || |||||| | || || || | Sbjct 23554 GAGAGGCCAAGTTGCAAACAGCAACCTCATCAGGGGCACAGTACTCAATGATCTCCGTGC 23613 Query 23085 ATAGATT---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACG 23141 | ||||| ||| | || || |||| ||| |||||||||| || | ||||| | Sbjct 23614 ACAGATTAGAGCTGCGA---ATGGTTCCCAGATTTTTCTGGTTGCTCTTCCTGTTGCAGG 23670 Query 23142 AATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCC 23201 ||| ||||| ||||| | || ||||||| ||| ||| | ||||| ||| | || Sbjct 23671 CATCTTTGTACAGCATAAAGGGGTTGCCCGTTTCGGTCTGGGCCTCGAGGATGGAGTACC 23730 Query 23202 ACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTAC 23260 | | |||| || ||| | ||| || | | ||| || ||| ||||| | ||| Sbjct 23731 AGAGCTTCTGGGCACGAATA-GTCTTGCGGCCACGGCCCTCACGCTCATACTTCTCGTAG 23789 Query 23261 AACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATG 23320 | || ||||| || | || || || || |||||||| || | | | ||||||||| Sbjct 23790 AGAGCCTCAAACTCCTCGCCATAGCAATCAGCCAGGCCAGGGCACTCGTTGGGACACATG 23849 Query 23321 AGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCG 23380 || |||| || ||||| ||||| |||| |||||||| || ||||| ||||| Sbjct 23850 AGGGTCCAATCCCCGTTCTTTTCGACGCGCTTCATGAAAAGATCTGGGATCCACAGAGCA 23909 Query 23381 TAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAG 23440 ||| || ||||| || || || || |||||| ||||||| |||||| | |||| Sbjct 23910 AGGAAGAGGTCGCGAGCACGGTTTTCTTCCTTGCCGTGGTTCTTTCGCAAATCAAGAAAG 23969 Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500 || |||||||| || ||||| ||||||||||| | ||||| || || |||| ||||||| Sbjct 23970 TCAAACACGTCTGCGTGCCAAGGCTCGAGGTAGATAGCAAATGCACCAGGTCGCTTATTG 24029 Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560 |||||||| || ||||| | ||| ||||||||| | || | ||||| || | || ||| Sbjct 24030 CCGCCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGATGCCG 24089 Query 23561 TTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGG 23620 ||||| | ||| ||| || | || || | || || | | ||| |||| Sbjct 24090 TTGGATGTACCGTTGGTGCCGGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTC 24149 Query 23621 AAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATG 23680 || || || || || || || || ||||| || || || |||||||||||||| Sbjct 24150 AAGCCGATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCGTAGATA 24209 Query 23681 CCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGC 23740 || || |||||||| || || | | || | |||||| ||||||| || || ||| Sbjct 24210 CCGTCAATGCTGTCGTCCTTCATGTCAACTAGGAAACAGGAAGACAGCTGACATTGGGGG 24269 Query 23741 GTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTG 23800 ||| | || ||| ||||| || |||||| || ||| | ||||| || | | Sbjct 24270 GTACCAGCGTTGAAGAGTGTAGGTGAGGCGTGGGTGAAGAGCTTGCTGGACATGAGGTGG 24329 Query 23801 TACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATC 23860 || || || | || || |||| ||||| ||||||| || |||||||| ||| Sbjct 24330 TAAGTCTCCAAAACGCGTTCGATGTTGTCTCCCCAAATACCGACCGCAACGCGCATAATC 24389 Query 23861 ATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920 |||| ||||||| |||||| | |||||| | ||||| |||||||| | | || Sbjct 24390 ATGTGCTGAGGTCGCTCGACGATCTTGCCGTTGAGTTTGAGAAGATATGATCTCTCCAGA 24449 Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || || ||||| || | |||||| ||||| | |||| || ||||| || Sbjct 24450 GTCTTGAAGCCAAAGTATTGATAGTTGAAGTCTCTGTCGTAGACGATGGCGGA 24502 >seq258 Length=42171 Score = 336 bits (372), Expect = 2e-87 Identities = 600/873 (69%), Gaps = 2/873 (0%) Strand=Plus/Minus Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || || |||| || |||||||||| |||| ||||| | ||||||||| ||||| | Sbjct 14891 ATGGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGTTGCAGGCATCCTTGTACAGCATAAAG 14832 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || ||||||| ||| ||| ||||||| ||| | ||| | |||| || ||| | Sbjct 14831 GGGTTGCCCGTTTCGGTCTGGGACTCGAGGATGGAGTACCAGAGCTTCTGGGCACGAATA 14772 Query 23222 CGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 ||| || | | ||| || ||| ||||||| ||| | || |||||||| | || Sbjct 14771 -GTCTTGCGGCCACGGCCCTCACGCTCATACTTTTCGTAGAGAGCCTCAAATTCCTCGCC 14713 Query 23281 GTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT 23340 || || || |||||||| || | | | ||||||||||| |||| || || Sbjct 14712 ATAGCAATCAGCCAGGCCAGGGCACTCGTTGGGACACATGAGGGTCCAATCCCCGTTCTT 14653 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| ||||| |||| || ||||| || ||||| ||||| ||| || ||||| || || Sbjct 14652 TTCGACGCGCTTCATGAAGAGATCTGGGATCCACAGAGCAAGGAAGAGGTCGCGAGCACG 14593 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 || || || ||| ||||||| |||||| | |||||| |||||||| || ||||| Sbjct 14592 ATTTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGAAAGTCGAACACGTCTGCGTGCCA 14533 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||||||||| | |||||| || || |||| ||| || |||||||| || ||||| | Sbjct 14532 AGGCTCGAGGTAGATGGCAAATGCACCAGGTCGCTTGTTACCGCCCTGGTCAACGTATCT 14473 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||||||| | || | ||||| || | || |||||||| | ||| ||| Sbjct 14472 GGCAGTGTTGTTGAAGACGCGGAGCATGGGAATGATGCCGTTGGATGTACCGTTGGTGCC 14413 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | || || | || || | | ||| |||| || || || || || || Sbjct 14412 GGCAATGTAAGAGCCGGTAGCACGGATGCGGTGGACGTTCAAGCCGATTCCACCAGCCAT 14353 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || || |||||||||||||| || || |||||||| || || Sbjct 14352 CTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCGTCAATGCTGTCGTCCTT 14293 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | |||||| ||||||| || || ||| ||| | || ||| ||||| Sbjct 14292 CATGTCGACTAGGAAACAGGAAGACAGCTGACATTGGGGGGTACCAGCGTTGAAGAGTGT 14233 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| || ||| | ||||| || | ||| || || | || || Sbjct 14232 AGGTGAGGCGTGGGTGAAGAGCTTGCTGGACATGAGGTGGTAGGTCTCCAAAACGCGCTC 14173 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 ||| | ||||| ||||||| ||| |||||||| ||||||| || |||| |||||| Sbjct 14172 AATATTGTCTCCCCAAATACCGACGGCAACGCGCATAATCATGTGCTGGGGTCGCTCGAC 14113 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | |||||| | ||||| |||||||| | | || || || || ||||| || | Sbjct 14112 AATCTTGCCGTTGAGTTTGAGAAGATATGATCTCTCCAGAGTCTTGAAGCCAAAGTATTG 14053 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 |||||| ||||| | |||| || || || || Sbjct 14052 ATAGTTGAAGTCTCTGTCGTAGACAATAGCGGA 14020 Score = 168 bits (186), Expect = 6e-37 Identities = 362/533 (68%), Gaps = 15/533 (3%) Strand=Plus/Minus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| | || |||||||||||||| ||||||| |||||| | ||| || || || Sbjct 15848 GTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAACTTCCAGCCAGCAAAGTGCATAGAG 15789 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || | | || | ||||| || |||| |||||| ||| |||||| Sbjct 15788 GTGATCTTGCCCATAGTAGGATCCTTCATGTGGACGTTGAGCGACTGGGACTGGTCGATA 15729 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCA-ATGTACGCATCGACATTTCCCATACGGT 22323 || || || |||||||||||||| | || | ||| |||| || || ||||| || || Sbjct 15728 AAGGCACCGCGATCGGCGGCCATCTGGATAACATG-ACGCTGAGAAATCTCCCAAACAGT 15670 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTA 22381 ||| || || | |||| || || || ||| | || |||| | ||| || || Sbjct 15669 CTTATAGAGAGCCTTGATGTCGGCGGGGAT--ATTGGGGATGTTCTGAATGGAACCATTC 15612 Query 22382 TTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441 | | ||||| || || || | ||| ||| | ||| ||| || | ||| ||| Sbjct 15611 TCGGCAATGATGCGGTTCTTCATGGCATCAGACCAGAGACCCATGTCGACGAGATCCTTG 15552 Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501 | || |||| || || || || || || | |||||| ||||| |||||||||||| Sbjct 15551 AGGAGCCAGGGGTTGACGACCTGGAATTCACCAGCCAAGACACGGCGCTGGTAAATGTTG 15492 Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || || || | |||||||| ||||| || || | |||||| ||||| ||| Sbjct 15491 GACGTGTATGGCTCAAAGCACTCATTGTTACCCAGAATTTGCGAGGTCGATGCGGTGGGC 15432 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACT-CTTGAGC 22618 || || || | ||| | |||||| | | ||||||| |||| | | || ||| || Sbjct 15431 ATGGGAGCGAGCAGCAACGAGTTGCGAATACCGTGCTCCTTGA---TCTGCTCCTTCAGA 15375 Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 | ||| ||||| | || || ||| | ||||| |||||| ||| |||| Sbjct 15374 TTGTCCCACTCCCATAACTCAGAAGGCTTGACATT---CCACATGTCGAATTG 15325 >seq39 Length=88371 Score = 116 bits (128), Expect = 3e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 31181 ATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGAC 31240 || ||| ||| ||||||||| ||||| ||||| || || ||||| || || || |||| Sbjct 31531 ATCGAAGCAACCATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATTACTCTCGAG 31472 Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300 || || |||| || | | | || | ||||| || || |||||||||||| | Sbjct 31471 GTCGAGTCGTCTGATACTATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAAGGAATC 31412 Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360 || || ||||||||||||||||| |||||||| || ||| | || ||| ||| | Sbjct 31411 CCCCCTGACCAGCAGCGTCTAATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACTCTT 31352 Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || || || || ||||| || || || Sbjct 31351 TCTGATTACAACATTCAGAAGGAGTCAACACTTCACCTCGTTCT 31308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| |||| || || || || ||| | || || ||| | || Sbjct 30762 ATGCAAATTTTTGTCAAGACCTTGACTGGAAAGACTATTACCTTGGAAGTCGAATCTTCT 30703 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | |||||| | || ||| ||||| || | || || |||||| Sbjct 30702 GATACCATCGACAATGTCAAATCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 30643 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || ||| |||||||| || ||||||| || ||| Sbjct 30642 CAACGACTTATTTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACGCTGAGCGACTACAAC 30583 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || ||| ||| | ||||| || ||| | ||| | || ||| Sbjct 30582 ATCCAGAAGGAAAGCACTTTGCATCTCGTGCTTCGTCTGCGAGGTGGT 30535 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| ||||| || || || | || |||||| | || Sbjct 30990 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATTACATTGGAAGTTGAATCCTCG 30931 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || || ||||||||| | || || |||||| Sbjct 30930 GATACGATCGATAATGTAAAGTCTAAGATTCAAGATAAGGAAGGCATTCCCCCTGACCAG 30871 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| | || || ||| || ||| || || Sbjct 30870 CAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGAACTTTGTCCGACTACAAT 30811 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| ||| | || || | ||| |||| |||| Sbjct 30810 ATTCAGAAGGAGTCTACTCTGCATTTAGTCCTGCGTCTGCGGGGTGGTA 30762 >seq13 Length=129688 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| |||| || || || |||||| | || || ||| | || Sbjct 70950 ATGCAAATTTTTGTCAAGACCTTGACTGGAAAGACTATCACCTTGGAAGTCGAATCTTCT 70891 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| || |||||| | || ||| ||||| || | || ||||||||| Sbjct 70890 GATACCATCGACACTGTCAAATCCAAGATTCAGGATAAGGAGGGAATCCCTCCCGACCAG 70831 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || ||| |||||||| || ||||||| |||||| Sbjct 70830 CAACGACTTATTTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACGCTGAGCGACTATAAC 70771 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || ||| ||| | |||| || ||| | ||| | || ||| Sbjct 70770 ATCCAGAAGGAAAGTACTTTGTATCTCGTGCTTCGTCTGCGTGGTGGT 70723 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| ||||| || ||||| | || || ||| | || Sbjct 71178 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACATTGGAAGTCGAATCTTCG 71119 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || |||||||||||| | || || |||||| Sbjct 71118 GATACAATCGATAATGTAAAGGCTAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCAG 71059 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| | || || ||| || ||| || || Sbjct 71058 CAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGAACTTTGTCCGACTACAAT 70999 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||| | ||| |||| || | ||| |||| |||| Sbjct 70998 ATTCAGAAGGAGTCTACTTTGCATTTGGTCCTGCGTCTGCGGGGTGGTA 70950 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 31181 ATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGAC 31240 || ||| || ||||||||| ||||| ||||| || || ||||| || || || |||| Sbjct 71719 ATCGAAGAAATCATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATTACTCTCGAG 71660 Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300 || || |||| || | | || | ||||| || || ||| ||||| || | Sbjct 71659 GTCGAGTCGTCTGATACCATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGAATC 71600 Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360 || ||||||||||||||||| || |||||||| || ||| | || ||| ||| | Sbjct 71599 CCCCCCGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACTCTT 71540 Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || ||||| || || || || || ||||| || || || Sbjct 71539 GCTGACTACAACATCCAGAAGGAGTCAACCCTTCACCTCGTCCT 71496 >seq864 Length=18104 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||||||||| ||||| || |||||| | || || || | || |||| | Sbjct 8313 TTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 8372 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | ||| |||||||| ||| | || || || |||||||| | Sbjct 8373 CGACAATGTCAAGTCCAAAATCCAAGACAAGGAGGGCATTCCCCCTGATCAGCAGCGATT 8432 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||||||||| ||| | || ||| | || || ||| || |||||||| || Sbjct 8433 GATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGAACCCTGTCCGACTACAACATTCAGAA 8492 >seq86 Length=67758 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| ||||| || |||||| | || || || | || |||| | Sbjct 45412 TTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 45471 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | ||| |||||||| ||| | || || ||||||||||| | Sbjct 45472 CGACAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATTCCCCCTGACCAGCAGCGATT 45531 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||||||||| ||| | || ||| | || || ||| || |||||||| || Sbjct 45532 GATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGAACCCTGTCCGACTACAACATTCAGAA 45591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445637673807840