Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq258 289 5e-73 seq248 286 7e-72 seq15 147 4e-30 seq539 132 9e-26 >seq258 Length=42171 Score = 289 bits (320), Expect = 5e-73 Identities = 1103/1711 (64%), Gaps = 53/1711 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| |||||| | || |||| || | || |||||||||||| |||||| Sbjct 15881 ACGGTGAACTGGATGGGTGCAGCAGCAGCCTGCGTGCGCAAGTAGTACATGCCCGTCTTG 15822 Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 || || ||| |||| | | |||||| | || | ||| ||| || | Sbjct 15821 AGACCCAACTT--CCAGCCAGCAAAGTGCATAGAGGTGATCTTGCCCAT----AG---TA 15771 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 || |||| || || |||||| |||||| |||||||| |||| | || | Sbjct 15770 GGA--TCCTT---CATGTGGACGTTGAGCGACTGGGACTGGTCGATAAAGGCACCGCGAT 15716 Query 243915 CTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 | |||||||| ||| | | |||||| ||||| | | ||||| |||| | || Sbjct 15715 CGGCGGCCATCTGGATAACATGACGCTGAGAAATCTCCCAAACAGTCTTATAGAGAGCCT 15656 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 ||| || |||||| ||||||||| | || || || | | | |||| || Sbjct 15655 TGATGTCGGCGGGGATATTGGGGATGTTCTGAATGGAACCATTCTCGGCAATGATGCGGT 15596 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---T 244091 | |||| ||| ||| || |||| | | || ||| || || ||| | | Sbjct 15595 TCTTCATGGCATCAGACCAGAGACCCATGTCGACGAGATCCTTGA---GGAGCCAGGGGT 15539 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || ||||| || || || | || || ||||||||||| | |||| || |||| Sbjct 15538 TGACGACCTGGAATTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGACGTGTATGGCT 15479 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 | | || ||| |||| ||||| || |||| || || || |||||||| | | || Sbjct 15478 CAAAGCACTCATTGTTACCCAGAATTTGCGAGGTCGATGCGGTGGGCATGGGAGCGAGCA 15419 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 ||| ||| | | |||||| || ||| | | || | || ||| ||||| | Sbjct 15418 GCAACGAGTTGCGAATACCGTGCTCCTTGATCTGCTCCTTCAGATTGTCCCACTCCCATA 15359 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 | || ||| |||| ||||||||| || || || | || | | Sbjct 15358 ACTCAGA-AGGC--------TTGACATTCCACATGTCGAATTGAAGAATACCTTCCGAGG 15308 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG-GGCCAGCTTAC-AGCTCTC 244389 |||| ||||| | |||| | |||||| || | || || |||||||| | || Sbjct 15307 CGGGAGAGCCCTTGAAGGTAGAGTAGGGGCCTT-GCTCTTTGGCCAGCTCAAGAGAGGCT 15249 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449 ||| ||||| |||| ||||||||||||||||||| |||||| | || ||||||| | Sbjct 15248 GTC-AGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGGGCCTCGGG 15190 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGA-CGTCGGCCAGTCCCTGCACGCCGATGC 244508 | |||||| |||| || | || ||| | |||| || || ||||| || || | | Sbjct 15189 AGACTCGAAGGGCATGCGCAG-AGCAAGAAAAGCGTCAGCAAGACCCTGAACACCAACAC 15131 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||||| |||||| ||||| | || || | ||||||| |||| | | Sbjct 15130 CGATGGGTCGATGTCGCATGTTGCTGTTGCGAGCCTCCTCAATGGGGTAATGGTTGACAT 15071 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 | || | |||||||||||| ||| || || | ||| ||| ||| ||| |||| Sbjct 15070 CAATGATCTTGTTGAGGTTACGGACGACCACTTGAGTGACCTCGTGGAGCTTCTGGAAGT 15011 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 |||| || | || | || || || || | ||||| | || Sbjct 15010 CGTAGC----GGCCTTCT------TTGTAGTCG--ACGAAGGCAGGCAGGGCAAGAGAGG 14963 Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748 ||| |||||| || || ||||| || | | ||||| | ||||| ||||| |||| Sbjct 14962 CCAAGTTGCAAACAGCAACCTCATCGGGGGCACAGTACTCAATGATCTCCGTGCACAGGT 14903 Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808 | || ||||| ||||||| || || ||| ||| ||||||||| ||||||| Sbjct 14902 TGGAGCTGCGAATGGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGTTGCAGGCATCCTTGT 14843 Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868 | ||||| ||||| || || ||| ||||| |||||| | || |||||| | | Sbjct 14842 ACAGCATAAAGGGGTTGCCCGTTTCGGTCTGGGACTCGAGGATGGAGTACCAGAGCTTCT 14783 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || | ||| |||| | |||||| ||| || ||| || ||||| | Sbjct 14782 GGGCACGAATAGTCTTGCGGCCACGGCCCTCACGCTCATACTTTTCGTAGAGAGCCTCAA 14723 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCAC 244987 | || ||| || || | ||||| |||||| || ||| |||||||| |||| Sbjct 14722 ATTCCTCGCCATAGCAATCAGCCAGGCCAGGGCACT-CGTTGGGACACATGAGGGTCCAA 14664 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 || ||| | | ||| | || ||||||||| || |||||||| || || |||||||| Sbjct 14663 TCCCCGTTCTTTTCGACGCGCTTCATGAAGAGATCTGGGATCCACAGAGCAAGGAAGAGG 14604 Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 || | | | | || ||| || |||||| | || || | |||||| || ||| Sbjct 14603 TCGCGAGCACGATTTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGAAAGTCGAACACG 14544 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 || ||||||| ||||| | ||||| || | || || || |||||||| || |||||| Sbjct 14543 TCTGCGTGCCAAGGCTCGAGGTAGATGGCAAATGCACCAGGTCGCTTGTTACCGCCCTGG 14484 Query 245168 TCCACCATCCTCTCGAGCGC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226 || || || | || | |||||||| ||| || | || | |||||||| || Sbjct 14483 TCAACGTATCTGGC-AGTGTTGTTGAAGACGCGGAGCATGGGAATGATGCCGTTGGATGT 14425 Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAG 245286 ||||||||||| ||||| | ||| | | | || | | || | || ||| | Sbjct 14424 ACCGTTGGTGCCGGCAATGTAAGAGCCGGTAGCACGGATGCGGTGGACGTTCAAGCCGAT 14365 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||| || || ||||||||| | ||| || |||||| ||||| || || || || Sbjct 14364 TCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCGTCAAT 14305 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||||| |||||||| || || || ||||| |||||||| | |||| | | | Sbjct 14304 GCTGTCGTCCTTCATGTCGACTAGGAAACAGGAAGACAGCTGACATTGGGGGGTACCAGC 14245 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 |||||| || || || ||||||||| ||| Sbjct 14244 GTTGAAGAGTGTAGGTGAGGCGTGGGTGAAG 14214 >seq248 Length=42843 Score = 286 bits (316), Expect = 7e-72 Identities = 1109/1715 (65%), Gaps = 61/1715 (4%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| |||||| | || |||| || | || |||||||||||| |||||| Sbjct 22641 ACGGTGAACTGGATGGGTGCAGCAGCAGCCTGCGTGCGCAAGTAGTACATGCCCGTCTTG 22700 Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 || || ||| |||| | | |||||| | || | ||| ||| || | | Sbjct 22701 AGACCCAACTT--CCAGCCAGCAAAGTGCATAGAGGTGATCTTGCCCAT----AG--TAG 22752 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 | || | | | ||| | ||||| |||||| |||||||| || | | || | Sbjct 22753 GATCCTTCATGT---GAACG---TTGAGCGACTGGGACTGGTCGATAAAAGCACCGCGAT 22806 Query 243915 CTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 | |||||||| ||| | | |||||| ||||| | | |||||||||| | || Sbjct 22807 CGGCGGCCATCTGGATAACATGACGCTGAGAAATCTCCCAAACAGTCTTGTAGAGAGCCT 22866 Query 243975 TGAGGTGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTG 244032 ||| || |||||| || | |||||||| | || || || | | | |||| | Sbjct 22867 TGATGTCGGCGGGGATA--TTGGGAATGTTCTGAATGGAACCGTTCTCGGCAATGATGCG 22924 Query 244033 GGTGCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTG- 244090 | | |||| ||| ||| || |||| | || | || ||| || || ||| | Sbjct 22925 GTTCTTCATGGCATCAGACCAAAGACCCATATCGA-CGAGATCCTTGA---GGAGCCAGG 22980 Query 244091 --TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCG 244148 || || ||||| || || || | || || ||||||||||| | |||| || | Sbjct 22981 GGTTGACGACCTGGAATTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGACGTGTATG 23040 Query 244149 GCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACA 244208 |||| | || ||| |||| ||||| || |||| || || || |||||||| | | Sbjct 23041 GCTCAAAGCACTCATTGTTACCCAGGATTTGCGAGGTAGAGGCGGTGGGCATGGGAGCGA 23100 Query 244209 CCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 ||||| ||| | | ||||| || ||| | | | | || ||| |||| Sbjct 23101 GCAGCAACGAGTTGCGAATATCGTGCTGCTTGATCTGCTCCTTCAAGTTGTCCCACTCCC 23160 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 ||| | || ||| |||| ||||||||| ||||| || | | |||| | Sbjct 23161 ACAACTCAGA-AGGC--------TTGACATTCCACATGTCGAACTGAAGAA-CACCTTCC 23210 Query 244329 T-GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG-GGCCAGCTTAC-AGC 244385 | |||| ||||| | |||| | |||||| || | || || |||||||| | || Sbjct 23211 GAGGCGGGAGAGCCCTTGAAGGTAGAGTAGGGGCCTT-GCTCTTTGGCCAGCTCAAGAGA 23269 Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445 ||| ||||| |||| ||| ||||||||||| || |||||| | || ||||||| Sbjct 23270 GGCTGTC-AGGGCAGCGTGGTAAATGGTCTCGAAAATTTGCTTGTTGAGCTCACGGGCCT 23328 Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGA-CGTCGGCCAGTCCCTGCACGCCG 244504 | | |||||| |||| || | || ||| | ||||||| || ||||| || || Sbjct 23329 CGGGAGACTCGAAGGGCATGCGCAG-AGCAAGAAAAGCGTCGGCAAGACCCTGAACACCA 23387 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564 | |||||||||| |||||| ||||| | || || | ||||||| |||| Sbjct 23388 ACACCGATGGGTCGATGTCGCATGTTGCTGTTGCGAGCCTCCTCAATGGGGTAATGGTTG 23447 Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624 | ||||| | |||||||||||| ||| || || | || ||| ||| ||| Sbjct 23448 ACATCGATGATCTTGTTGAGGTTACGGACGACCACTTGAGTCACCTCGTGGAGCTTCTGG 23507 Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 |||||||| || | || | || || || || | ||||| | Sbjct 23508 AAGTCGTAGC----GGCCTTCT------TTGTAGTCG--ACGAAGGCAGGCAGGGCAAGA 23555 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||| |||||| || || ||||| || | | ||||| | ||||| ||||| Sbjct 23556 GAGGCCAAGTTGCAAACAGCAACCTCATCAGGGGCACAGTACTCAATGATCTCCGTGCAC 23615 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 || ||| || ||||| ||||| | | || ||| ||| ||||||||| || Sbjct 23616 AGATTAGAGCTGCGAATGGTTCCCAGATTTTTCTGGTTGCTCTTCCTGTTGCAGGCATCT 23675 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| ||||| ||||| || || ||| |||||| |||||| | || |||||| Sbjct 23676 TTGTACAGCATAAAGGGGTTGCCCGTTTCGGTCTGGGCCTCGAGGATGGAGTACCAGAGC 23735 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | || | ||| |||| | |||||| ||| || ||| || ||| Sbjct 23736 TTCTGGGCACGAATAGTCTTGCGGCCACGGCCCTCACGCTCATACTTCTCGTAGAGAGCC 23795 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACT 244983 || ||||| ||| || || | ||||| |||||| || ||| |||||||| | Sbjct 23796 TCAAACTCCTCGCCATAGCAATCAGCCAGGCCAGGGCACT-CGTTGGGACACATGAGGGT 23854 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || ||| | | ||| | || |||||| || || |||||||| || || |||| Sbjct 23855 CCAATCCCCGTTCTTTTCGACGCGCTTCATGAAAAGATCTGGGATCCACAGAGCAAGGAA 23914 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 |||||| | | | | || ||| ||| |||||| | || || | ||||||||| Sbjct 23915 GAGGTCGCGAGCACGGTTTTCTTCCTTGCCGTGGTTCTTTCGCAAATCAAGAAAGTCAAA 23974 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||||| ||||||| ||||| | ||||| ||| | || || || ||||| ||||| || Sbjct 23975 CACGTCTGCGTGCCAAGGCTCGAGGTAGATAGCAAATGCACCAGGTCGCTTATTGCCGCC 24034 Query 245164 CTGGTCCACCATCCTCTCGAGCGC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 |||||| || || | || | |||||||| ||| || | || | |||||||| | Sbjct 24035 CTGGTCAACGTATCTGGC-AGTGTTGTTGAAGACGCGAAGCATGGGAATGATGCCGTTGG 24093 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGC 245282 | ||||||||||| ||||| | ||| || | | || | | || | || || Sbjct 24094 ATGTACCGTTGGTGCCGGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGC 24153 Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342 | | || || || ||||||||| | ||| ||| |||||| ||||| || || | Sbjct 24154 CGATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCGTAGATACCGT 24213 Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGC 245402 | |||||||| |||||||| | || || ||||| |||||||| | |||| | | Sbjct 24214 CAATGCTGTCGTCCTTCATGTCAACTAGGAAACAGGAAGACAGCTGACATTGGGGGGTAC 24273 Query 245403 ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | |||||| || || || ||||||||| ||| Sbjct 24274 CAGCGTTGAAGAGTGTAGGTGAGGCGTGGGTGAAG 24308 >seq15 Length=125974 Score = 147 bits (162), Expect = 4e-30 Identities = 308/445 (69%), Gaps = 13/445 (3%) Strand=Plus/Minus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| | || | |||| || || | || || ||||||||||||||| || ||||| Sbjct 19353 TTCGCCCAGCGCTTGGTGGCTTTCGCTGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTT 19294 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGA 42811 || || || |||||||||||| || | ||| ||||||||| ||||||||||| ||||| Sbjct 19293 GCGTCGATTTTCTGGCTCAAGAAGCGTG-GTCTGATGCCCGGCCTCACCTTCTCTAACGA 19235 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||| ||| | | || ||||| |||| | || ||||| || || || |||| || Sbjct 19234 ACTTATCTCCCGTGATGAGGGTTTGCACACAGATTTTGCATGTCTGTTGCACTCG---CA 19178 Query 42872 CCTCAGGCA-CAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 || | ||| | |||| | ||| | ||| || |||||||| || || || | | Sbjct 19177 TCTTAAGCACCGAGCCAGC-AAGCAAATTATCCAGGATATCATCACCGACGCTGTTGGCA 19119 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGAC 42989 | ||| | ||||| | || || | ||| |||||| | || | ||||||||| | Sbjct 19118 TTGAGCAAGAGTTTTTGACCGAGGCTCTG-CCGTGTGCTCTCCTAGGCATGAACGCCACA 19060 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 || ||| |||| || || | | |||||||| | ||| | || || | ||| | Sbjct 19059 CTAATGAAGCAA-TATATTGAATTTGTCGCCGATCGTCTATTGGTTGCA-CTTGGTAACG 19002 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | ||||| || | ||||||||| || ||||||||||| || |||| |||| Sbjct 19001 AAAAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAGAACATTTCCTTGGGTGGCA 18942 Query 43108 AGACCAACTTTTTCGAGAAGCGCGT 43132 |||| ||||||||||||||||| || Sbjct 18941 AGACAAACTTTTTCGAGAAGCGAGT 18917 >seq539 Length=27760 Score = 132 bits (146), Expect = 9e-26 Identities = 305/446 (68%), Gaps = 15/446 (3%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| | || | |||| || || | || || ||||| ||||||||| || ||||| Sbjct 8065 TTCGCCCAGCGCTTGGTGGCTTTCGCTGCTGTGGAGGGTATCTTCTTCAGCGGTGCCTTT 8124 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||||| || |||||||||||| || ||| | |||||| || ||||||||||| ||||| Sbjct 8125 GCCTCGATTTTCTGGCTCAAGAAGCGTGGTCT-GATGCCAGGTCTCACCTTCTCTAACGA 8183 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||| ||| | | || ||||| |||| | ||||||||||| || || |||| || Sbjct 8184 ACTTATCTCCCGTGATGAGGGTTTGCACACAGACTTTGCCTGTCTGTTGCACTCG---CA 8240 Query 42872 CCTCAGGCA-CAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 || | ||| | |||| | ||| | | | || || ||||| || || || | | Sbjct 8241 TCTAAAGCACCGAGCCAGC-AAGCAAGTTATTCAGGATATTATCACCGACGCTGTTGGCA 8299 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGAC 42989 | ||| | ||||| | || || | ||| |||||| | || | ||||||||| | Sbjct 8300 TTGAGCAAGAGTTTTTGACCGAGGCTCTG-CCGTGTGCTCTCCTAGGCATGAACGCCACA 8358 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTC 43046 || ||| |||| ||||| | | |||||||| | || || ||| | ||| | Sbjct 8359 CTAATGAAGCAA-TACATTGAATTTGTCGCCGATCGCCTATTGGTTGC--TCTTGGTAAC 8415 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | ||||| || | ||||||||| || ||||| ||||| || |||| ||| Sbjct 8416 GAAAAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAAAACATTTCCTTGGGTGGC 8475 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGT 43132 ||||| ||||| ||||||||||| || Sbjct 8476 AAGACAAACTTCTTCGAGAAGCGAGT 8501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944066498447520