Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq258 129 6e-25 seq1283 125 7e-24 seq633 125 7e-24 seq864 122 8e-23 seq13 113 4e-20 seq14377 107 2e-18 seq539 107 2e-18 seq86 107 2e-18 seq15 105 6e-18 seq39 104 2e-17 seq248 98.7 9e-16 >seq258 Length=42171 Score = 129 bits (142), Expect = 6e-25 Identities = 1103/1749 (63%), Gaps = 70/1749 (4%) Strand=Plus/Minus Query 145852 TTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGTCTAT--CATGC 145909 || || || ||| ||| || || || | | | || ||||||||||| | || |||| Sbjct 15752 TTGAGCGACTGGGACTGGTCGATAAAGGCACCGCGATCGGCGGCCATCTGGATAACATG- 15694 Query 145910 ACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGT--GCTGGGGTATTTC 145967 || ||| ||| ||||| | || ||| ||||| |||||| || || ||| |||| Sbjct 15693 ACGCTGAGA-AATCTCCCAAACAGTCTTATAGAGAGCCTTGATGTCGGCGGGGATATTGG 15635 Query 145968 GTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAATTCTGGAGTGTA 146027 | |||||||| | || ||||| ||||| | || ||| || | || | Sbjct 15634 GG--ATGTTCTGAATGGAACCATTCTCGGCAATGATGCGGTTCTTCATGGCATCAGACCA 15577 Query 146028 AATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGC 146087 | || ||| ||||| |||||| ||| | ||||||| ||||| || || || || Sbjct 15576 GAGACCCATGTCGACGAGATCCTTGAGGAGCCAGGGGTTGACGACCTGGAATTCACCAGC 15517 Query 146088 GAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAG 146147 | || || | | | || | |||| ||| | ||||| || |||| |||||||| || Sbjct 15516 CAAGACACGGCGCTGGTAAATGTTGGACGTGTATGGCTCAAAGCACTCATTGTTACCCAG 15457 Query 146148 TATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTG 146207 || |||| |||| ||||| |||||| || | |||||| ||||| | | ||||| Sbjct 15456 AATTTGCGAGGTCGATGCGGTGGGCATGGGAGCGAGCAGCAACGAGTTGCGAATACCGTG 15397 Query 146208 -TCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATAT 146266 || |||| ||| ||| || ||| ||| | ||| || | | | || | || || Sbjct 15396 CTCCTTGA-TCTGCTCCTTCAGATTGTCCCACTCCCATAACTCA---GAAGGCTTGACAT 15341 Query 146267 TGTAGTTGTCGTAATGCATAGTGCCG-CGGAACAGGGGGCTATTCTCGTACGATTCATAA 146325 | | ||||| | || | | | || | || ||| | || | | | || Sbjct 15340 TCCACATGTCGAATTGAAGAATACCTTCCGAGGCGGGAGAGCC-CTTGAAGGTAGAGTAG 15282 Query 146326 GGACCGTCGATCTT-GGCCAGTTCGCAGCTAG-CTTCCAGAGCCGAAAAGTATATGGTCT 146383 || || | | |||| |||||| || || || || ||| || | ||| ||||||| Sbjct 15281 GGGCCTT-GCTCTTTGGCCAGCTCA-AGAGAGGCTGTCAGGGCAGCGTGGTAGATGGTCT 15224 Query 146384 CCGCGATCATGTAGTTGACGCTC-CTGGCCTCCTCGCTGTCGTAGGGGATATCGAGAAGC 146442 | |||| | ||||| |||| | |||||| ||| |||| || ||| Sbjct 15223 CGAAGATCTGCTTGTTGA-GCTCACGGGCCTCGGGAGACTCGAAGGGCATGCGCAGAGCA 15165 Query 146443 ACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTG 146502 | ||| ||||| || |||||||| | || ||||| | ||| || ||| | |||| ||| Sbjct 15164 AGAAAAGCGTCAGCAAGACCCTGAACACCAACACCGATGGGTCGATGTCGCATGTTGCTG 15105 Query 146503 TTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACG 146562 || ||| || || |||| || |||||| || |||||||||||||| ||||| ||| Sbjct 15104 TTGCGAGCCTCCTCAATGGGGTAATGGTTGACATCAATGATCTTGTTGAGGTTACGGACG 15045 Query 146563 ACAATTTTCGTCAAACGATTCAG---CAGGACATAGTCAAATGTTTTAGTTTTAACGTTG 146619 || | || || | | || | ||| | || | | || || || || | Sbjct 15044 ACCACTTGAGTGACCTCGTGGAGCTTCTGGAAGTCGT-AGCGGCCTTCTTTGTA--GTCG 14988 Query 146620 ACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAA 146679 ||| | | ||| | |||||||||||| || || ||| ||| || | | || Sbjct 14987 ACGAAGGCAGGCAGGGCAAGAGAGGCCAAGTTGCAAACAGCAACCTCATCGGGGGCACAG 14928 Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| | ||||| | ||| |||||| || ||| | |||| || || ||||| Sbjct 14927 TACTCAATGATCTCCGTGCACAGGTTGGAGCTGCGAATGGTTCCCAGGTTCTTCTGGTTG 14868 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTC 146799 || ||||||||| |||||||| ||||| | || || |||||| | || | Sbjct 14867 CTCTTTCTGTTGCAGGCATCCTTGTACAGCATAAAGGGGTTGCCCGTTTCGGTCTGGGAC 14808 Query 146800 TCGACGATGAATCTAAACAAATC-TCTGGCCTTTACTTGTCTTTCGTACA-GTTTATTCT 146857 |||| |||| | | || | | ||||| | | | ||||| || || | | Sbjct 14807 TCGAGGATGGA--GTACCAGAGCTTCTGGGCACGAATAGTCTTGCGGCCACGGCCCTCAC 14750 Query 146858 TTTCGTATTTCTCGTACAATATTTCAAA--ACTAGAACCGTACTCGTCGAGGAGGCCGGG 146915 || || || ||||| | ||||| || | || || || ||||| || Sbjct 14749 GCTCATACTTTTCGTAGAGAGCCTCAAATTCCTCG--CCATAGCAATCAGCCAGGCCAGG 14692 Query 146916 ATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAA 146975 ||| |||||||| | || | ||| || |||| | ||||| | ||| || | Sbjct 14691 GCACTCGTTGGGACACATGAGGGTCCAATCCCCGTTCTTTTCGACGCGCTTCATGAAGAG 14632 Query 146976 ATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAGC---CTTGGCGTCCTCGGAGCCCAT 147032 ||| || ||||| || | || | | ||||||||| || | |||| || Sbjct 14631 ATCTGGGATCCACAGAGCAAGGAAGAGGTCGCGAGCACGATTTTCTTCCT---TACCGTG 14575 Query 147033 GTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGC 147092 ||| || ||| | || | ||| | | || | ||||||||||| | ||| ||| Sbjct 14574 GTTCTTTCGCAAATCAAGAAAGTCGAACACGTCTGCGTGCCAAGGCTCGAGGTAGATGGC 14515 Query 147093 GAGTGCGCCTTTTCGC---TTACCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGAC 147149 | ||| || |||| ||||||||||| || |||| | | |||| |||||||| Sbjct 14514 AAATGCACCAGGTCGCTTGTTACCGCCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGAC 14455 Query 147150 TCGTAACATGGACACGAGGCCGCCGGATTT---TGTGGTGCCG---TTGTA------TTG 147197 || | ||||| | || |||| |||| | |||||||| |||| Sbjct 14454 GCGGAGCATGGGAATGATGCCGTTGGATGTACCGTTGGTGCCGGCAATGTAAGAGCCGGT 14395 Query 147198 AGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGA 147257 ||| | || || || ||| ||| |||| || || ||| || || |||| || | Sbjct 14394 AGCACGGATGCGGTGGACGTTCAAGCCGATTCCACCAGCCATCTTGGAGATCATGGCACA 14335 Query 147258 C-TCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAAC 147316 | || || | || | |||||| ||||| |||||||| ||||| ||| ||||||| Sbjct 14334 CGTCTTG-AGAGTGTCGTAGATACCGTCAATGCTGTCGTCCTTCATGTCGACTAGGAAAC 14276 Query 147317 ACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGA 147376 | ||| ||| || | || || || || || || || |||||| |||| Sbjct 14275 AGGAAGACAGCTGACATTGGGGGGTACCAGCGTTGAAGAGTGTAGGTGAGGCGTGGGTGA 14216 Query 147377 A---CGTGCCCAGACTCATCAATTGATACGTTTC--AATGGCGCTC-ATAACGTCATCGC 147430 | | || | || ||| | || || || || || |||||| ||| ||| || | Sbjct 14215 AGAGCTTG-CTGGA--CATGAGGTGGTAGGTCTCCAAAACGCGCTCAATATTGTC-TCCC 14160 Query 147431 CGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCAT 147490 | ||| | | ||| |||||||| | ||||||||||||||| || ||||| | | | Sbjct 14159 C--AAATACCGACGGCAACGCGCATAATCATGTGCTGGGGTCGCTCGACAATCTTGCCGT 14102 Query 147491 TGACTTTTAATAGATATCCATTGGTCAGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGT 147550 ||| ||| | |||||| | |||||| ||||| |||||||| | |||| | ||| Sbjct 14101 TGAGTTTGAGAAGATATGATCTCTCCAGAGTCTTGAAGCCAAAGTATTGATAGTTGAAGT 14042 Query 147551 CCCTGTTGT 147559 | |||| || Sbjct 14041 CTCTGTCGT 14033 >seq1283 Length=10397 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | || ||| || || || ||||| |||| | Sbjct 2764 CCACCACGAAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 2705 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||| | ||| ||||| || || || Sbjct 2704 AAGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGTTGCTGGTCCGGGGGA 2645 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| ||||| ||| |||||| | | ||| || Sbjct 2644 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT-CGATGGTGTCGGAAGACTCCAC 2586 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| || || || || ||||| || ||||||||||| Sbjct 2585 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTTTTGACGAAAATCTGCAT 2538 >seq633 Length=24846 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||||||||| | || ||| || || || ||||| |||| || ||||| | Sbjct 19935 CGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 19994 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || ||||| |||| | ||| ||||| || || || |||||||||||| Sbjct 19995 TCCTCGAGCTGCTTACCAGCAAAGATAAGTCGTTGCTGGTCCGGGGGAATGCCCTCCTTG 20054 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| |||||| | | ||| || || | ||| | Sbjct 20055 TCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 20113 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || || || ||||| || ||||||||||| Sbjct 20114 CGTCTTCCCCGTGAGGGTTTTGACGAAAATCTGCAT 20149 >seq864 Length=18104 Score = 122 bits (134), Expect = 8e-23 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || ||||| ||||| ||| || || ||| || || ||||| || |||||| ||||| Sbjct 8492 TTCTGAATGTTGTAGTCGGACAGGGTTCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATC 8433 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 |||||||||||||| || || |||||||||||||| |||||| ||||| | ||| Sbjct 8432 AATCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGGATTTTGGACTTGACATTGTCG 8373 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || ||||| |||||||| || || ||| Sbjct 8372 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAA 8313 Query 127106 ATCTGCATGGCTTATT 127121 ||| |||| |||| Sbjct 8312 --CTGAATGGTGTATT 8299 >seq13 Length=129688 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||||| | |||||||| || ||||||||||| ||| | Sbjct 70952 CCACCCCGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGTAGTCGGAC 71011 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||| | ||||||||| || || || Sbjct 71012 AAAGTTCGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGA 71071 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| || || ||| | | |||| || |||| | |||||| Sbjct 71072 ATGCCTTCCTTGTCTTGAATCTTAGCCTTTACATTATCGATTGTATCCGAAGATTCGACT 71131 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| ||| || || || |||||||| Sbjct 71132 TCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 71178 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | | || ||| ||| || ||||| || ||| Sbjct 71210 GTGGATTCCTTCTGGATATTGTAGTCGGCGAGGGTACGACCATCTTCCAGCTGCTTACCA 71269 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||||||||||||| ||||| || || ||||| ||| || ||| ||| Sbjct 71270 GCGAAGATCAATCGCTGCTGATCAGGAGGAATACCTTCCTTATCCTGAATCTTCGATTTG 71329 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| |||| ||| | || || || |||| ||| Sbjct 71330 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCAGTCAAAGTC 71389 Query 127097 TTTACAA 127103 || |||| Sbjct 71390 TTGACAA 71396 >seq14377 Length=266 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 |||| || || | ||||||| |||||||| ||||||||||||| || | | | Sbjct 1 CCGACGCTGTTGGCATTGAGCAAGAGTTTTTGACCGAGGCTCTGCCGTGTGCTCTCCTAG 60 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||||| | |||| | ||||| |||||||||||||| ||||| | ||| Sbjct 61 GCATGAACGCCACACTAATGAAGCAATACATTGAATTTGTCGCCGATCGCCTATTGGTTG 120 Query 47473 AGCTAAAGTATCCCAA-GATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531 || ||| | || | | ||| | |||| || || ||||| || ||| | |||||| Sbjct 121 CTCTTG-GTAACGAAAAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAAAACATT 179 Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAA 47582 || | | |||||||| ||||| ||||||||||| || || |||||| || Sbjct 180 TCCTTGGGTGGCAAGACAAACTTCTTCGAGAAGCGAGTTGGAGAATATCAA 230 >seq539 Length=27760 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 |||| || || | ||||||| |||||||| ||||||||||||| || | | | Sbjct 8285 CCGACGCTGTTGGCATTGAGCAAGAGTTTTTGACCGAGGCTCTGCCGTGTGCTCTCCTAG 8344 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||||| | |||| | ||||| |||||||||||||| ||||| | ||| Sbjct 8345 GCATGAACGCCACACTAATGAAGCAATACATTGAATTTGTCGCCGATCGCCTATTGGTTG 8404 Query 47473 AGCTAAAGTATCCCAA-GATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531 || ||| | || | | ||| | |||| || || ||||| || ||| | |||||| Sbjct 8405 CTCTTG-GTAACGAAAAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAAAACATT 8463 Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAA 47582 || | | |||||||| ||||| ||||||||||| || || |||||| || Sbjct 8464 TCCTTGGGTGGCAAGACAAACTTCTTCGAGAAGCGAGTTGGAGAATATCAA 8514 >seq86 Length=67758 Score = 107 bits (118), Expect = 2e-18 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || ||||| ||||| ||| || || ||| || || ||||| || |||||| | ||| Sbjct 45591 TTCTGAATGTTGTAGTCGGACAGGGTTCGACCGTCCTCAAGCTGCTTGCCAGCGAAAATC 45532 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||| || || || |||||||||||||| |||||| ||||| | ||| Sbjct 45531 AATCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTGTCG 45472 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || ||||| ||||| || || || ||| Sbjct 45471 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAA 45412 Query 127106 ATCTGCATGGCTTATT 127121 ||| |||| |||| Sbjct 45411 --CTGGATGGTGTATT 45398 >seq15 Length=125974 Score = 105 bits (116), Expect = 6e-18 Identities = 165/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 |||| || || | ||||||| |||||||| ||||||||||||| || | | | Sbjct 19133 CCGACGCTGTTGGCATTGAGCAAGAGTTTTTGACCGAGGCTCTGCCGTGTGCTCTCCTAG 19074 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTT- 47471 | |||||||| | |||| | || || |||||||||||||| || || | ||| Sbjct 19073 GCATGAACGCCACACTAATGAAGCAATATATTGAATTTGTCGCCGATCGTCTATTGGTTG 19014 Query 47472 CA---GCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAAC 47528 || | ||| | | ||| | ||| | |||| || || ||||| || ||| | ||| Sbjct 19013 CACTTGGTAACGAA----AAGGTATACAAAACCGCCAACCCCTTCGATTTCATGGAGAAC 18958 Query 47529 ATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAA 47582 ||||| | | |||||||| ||||||||||||||||| || || |||||| || Sbjct 18957 ATTTCCTTGGGTGGCAAGACAAACTTTTTCGAGAAGCGAGTTGGAGAATATCAA 18904 >seq39 Length=88371 Score = 104 bits (114), Expect = 2e-17 Identities = 142/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | || || ||| || ||||| || ||| Sbjct 31022 GTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATCTTCCAGCTGCTTACCA 31081 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | ||||||||||||||||| ||||| || |||||||| ||| || ||| |||| Sbjct 31082 GCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTG 31141 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| || | ||| | || || ||||||| ||| Sbjct 31142 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTCAAAGTC 31201 Query 127097 TTTACAAAAATCTGCAT 127113 || |||| || ||||| Sbjct 31202 TTGACAACTAT-TGCAT 31217 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || ||||| | |||||||| || ||||||||||| ||| | Sbjct 30764 CCACCCCGCAGACGCAGGACTAAATGCAGAGTAGACTCCTTCTGAATATTGTAGTCGGAC 30823 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||| | ||||||||| || || || Sbjct 30824 AAAGTTCGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGA 30883 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| || || || ||| | | |||| || |||| || ||| Sbjct 30884 ATGCCTTCCTTATCTTGAATCTTAGACTTTACATTATCGATCGTATCCGAGGATTCAACT 30943 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| ||| || || || |||||||| Sbjct 30944 TCCAATGTAATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 30990 >seq248 Length=42843 Score = 98.7 bits (108), Expect = 9e-16 Identities = 1097/1753 (63%), Gaps = 78/1753 (4%) Strand=Plus/Plus Query 145852 TTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGTCTAT--CATGC 145909 || || || ||| ||| || || |||| | | || ||||||||||| | || |||| Sbjct 22770 TTGAGCGACTGGGACTGGTCGATAAAAGCACCGCGATCGGCGGCCATCTGGATAACATG- 22828 Query 145910 ACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGT--GCTGGGGTATTTC 145967 || ||| ||| ||||| | || || ||||| |||||| || || ||| |||| Sbjct 22829 ACGCTGAGA-AATCTCCCAAACAGTCTTGTAGAGAGCCTTGATGTCGGCGGGGATATTGG 22887 Query 145968 GTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAATTCTGGAGTGTA 146027 | ||||||||| | || || || ||||| | || ||| || | || | Sbjct 22888 G--AATGTTCTGAATGGAACCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCAGACCA 22945 Query 146028 AATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGC 146087 || || || ||||| |||||| ||| | ||||||| ||||| || || || || Sbjct 22946 AAGACCCATATCGACGAGATCCTTGAGGAGCCAGGGGTTGACGACCTGGAATTCACCAGC 23005 Query 146088 GAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAG 146147 | || || | | | || | |||| ||| | ||||| || |||| |||||||| || Sbjct 23006 CAAGACACGGCGCTGGTAAATGTTGGACGTGTATGGCTCAAAGCACTCATTGTTACCCAG 23065 Query 146148 TATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTG 146207 || |||| || | ||||| |||||| || | |||||| ||||| | | |||| Sbjct 23066 GATTTGCGAGGTAGAGGCGGTGGGCATGGGAGCGAGCAGCAACGAGTTGCGAATATCGTG 23125 Query 146208 -TCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATAT 146266 | |||| ||| ||| | ||| ||| | |||||| | | | || | || || Sbjct 23126 CTGCTTGA-TCTGCTCCTTCAAGTTGTCCCACTCCCACAACTCA---GAAGGCTTGACAT 23181 Query 146267 TGTAGTTGTCGTAATGCATAG----TGCCGCGGAACAGGGG-GCTATTCTCGTACGATTC 146321 | | ||||| | || | | | ||| || | || | || || | || | Sbjct 23182 TCCACATGTCGAACTGAAGAACACCTTCCGAGG--CGGGAGAGCCCTTGAAGGTAGAGT- 23238 Query 146322 ATAAGGACCGTCGATCTT-GGCCAGTTCGCAGCTAG-CTTCCAGAGCCGAAAAGTATATG 146379 ||| | | | |||| |||||| || || || || ||| || | ||| ||| Sbjct 23239 ---AGGGGCCTTGCTCTTTGGCCAGCTCA-AGAGAGGCTGTCAGGGCAGCGTGGTAAATG 23294 Query 146380 GTCTCCGCGATCATGTAGTTGACGCTC-CTGGCCTCCTCGCTGTCGTAGGGGATATCGAG 146438 ||||| || | ||||| |||| | |||||| ||| |||| || || Sbjct 23295 GTCTCGAAAATTTGCTTGTTGA-GCTCACGGGCCTCGGGAGACTCGAAGGGCATGCGCAG 23353 Query 146439 AAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTT 146498 | | ||| |||||||| |||||||| | || ||||| | ||| || ||| | |||| Sbjct 23354 AGCAAGAAAAGCGTCGGCAAGACCCTGAACACCAACACCGATGGGTCGATGTCGCATGTT 23413 Query 146499 ACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACG 146558 ||||| ||| || || |||| || |||||| ||||||||||||||||| ||||| Sbjct 23414 GCTGTTGCGAGCCTCCTCAATGGGGTAATGGTTGACATCGATGATCTTGTTGAGGTTACG 23473 Query 146559 CACGACAATTTTCGTCAAACGATTCAG---CAGGACATAGTCAAATGTTTTAGTTTTAAC 146615 ||||| | || |||| | || | ||| | || | | || || || Sbjct 23474 GACGACCACTTGAGTCACCTCGTGGAGCTTCTGGAAGTCGT-AGCGGCCTTCTTTGTA-- 23530 Query 146616 GTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTC 146675 || |||| | | ||| | |||||||||||| || || ||| ||| || | | Sbjct 23531 GTCGACGAAGGCAGGCAGGGCAAGAGAGGCCAAGTTGCAAACAGCAACCTCATCAGGGGC 23590 Query 146676 GCAATACTGCACAATCTCGGCGCAGAGGTT---GCTGCACTTGATGATGCCCAAAttttt 146732 || |||| | ||||| | ||| || || ||||| ||| | |||| |||||| Sbjct 23591 ACAGTACTCAATGATCTCCGTGCACAGATTAGAGCTGC---GAATGGTTCCCAGATTTTT 23647 Query 146733 ttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGAC 146792 ||||| || | ||||||||| || ||||| ||||| | || || |||||| Sbjct 23648 CTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTACAGCATAAAGGGGTTGCCCGTTTCGGT 23707 Query 146793 ATTGGTCTCGACGATGAATCTAAACAAATC-TCTGGCCTTTACTTGTCTTTCGTACA-GT 146850 | || ||||| |||| | | || | | ||||| | | | ||||| || || | Sbjct 23708 CTGGGCCTCGAGGATGGA--GTACCAGAGCTTCTGGGCACGAATAGTCTTGCGGCCACGG 23765 Query 146851 TTATTCTTTTCGTATTTCTCGTACAATATTTCAAA--ACTAGAACCGTACTCGTCGAGGA 146908 | || || |||||||| | ||||| || | || || || | Sbjct 23766 CCCTCACGCTCATACTTCTCGTAGAGAGCCTCAAACTCCTCG--CCATAGCAATCAGCCA 23823 Query 146909 GGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCA 146968 |||| || ||| |||||||| | || | ||| || |||| | ||||| | || Sbjct 23824 GGCCAGGGCACTCGTTGGGACACATGAGGGTCCAATCCCCGTTCTTTTCGACGCGCTTCA 23883 Query 146969 TAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGC 147028 | || | ||| || ||||| || | || | | ||||||||| | || || || Sbjct 23884 TGAAAAGATCTGGGATCCACAGAGCAAGGAAGAGGTCGCGAGCACGGTTTTCTTCCTTGC 23943 Query 147029 CCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATG 147088 | ||| || ||| | || | || | | || | ||||||||||| | ||| Sbjct 23944 CGTGGTTCTTTCGCAAATCAAGAAAGTCAAACACGTCTGCGTGCCAAGGCTCGAGGTAGA 24003 Query 147089 CGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGA 147145 || | ||| || ||||||| |||||||| || |||| | | |||| |||| Sbjct 24004 TAGCAAATGCACCAGGTCGCTTATTGCCGCCCTGGTCAACGTATCTGGCAGTGTTGTTGA 24063 Query 147146 AGACTCGTAACATGGACACGAGGCCGCCGGATTT---TGTGGTGCCG---TTGTA----- 147194 |||| || | ||||| | || |||| |||| | |||||||| |||| Sbjct 24064 AGACGCGAAGCATGGGAATGATGCCGTTGGATGTACCGTTGGTGCCGGCAATGTAAGAGC 24123 Query 147195 --TTGAGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAA 147252 || || | || || || ||| ||| |||| ||| || ||| || || |||| Sbjct 24124 CGGTG-GCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATCTTGGAGATCATG 24182 Query 147253 GCGGA-CTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAG 147311 || | || || | || | |||||| ||||| |||||||| ||||| ||| || Sbjct 24183 GCACAGGTCTTG-AGAGTGTCGTAGATACCGTCAATGCTGTCGTCCTTCATGTCAACTAG 24241 Query 147312 GAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTG 147371 |||||| ||| ||| || | || || || || || || || |||||| Sbjct 24242 GAAACAGGAAGACAGCTGACATTGGGGGGTACCAGCGTTGAAGAGTGTAGGTGAGGCGTG 24301 Query 147372 CGTGAA---CGTGCCCAGACTCATCAATTGATACGTTTC--AATGGCGCTCATAACGTCA 147426 ||||| | || | || ||| | || || || || || ||| || | || Sbjct 24302 GGTGAAGAGCTTG-CTGGA--CATGAGGTGGTAAGTCTCCAAAACGCGTTC--GATGTTG 24356 Query 147427 TCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACG 147486 || || ||| | | || |||||||| | ||||||||| ||||| || | ||| | Sbjct 24357 TCTCCCCAAATACCGACCGCAACGCGCATAATCATGTGCTGAGGTCGCTCGACGATCTTG 24416 Query 147487 TCATTGACTTTTAATAGATATCCATTGGTCAGAGTTTTGAAACCAAAGTACTTGTAGTCG 147546 | |||| ||| | |||||| | |||||| ||||| |||||||| | |||| | Sbjct 24417 CCGTTGAGTTTGAGAAGATATGATCTCTCCAGAGTCTTGAAGCCAAAGTATTGATAGTTG 24476 Query 147547 TAGTCCCTGTTGT 147559 |||| |||| || Sbjct 24477 AAGTCTCTGTCGT 24489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475363487256480