Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_019914.1 Length=40071 Score E Sequences producing significant alignments: (Bits) Value seq14008 84.2 6e-12 >seq14008 Length=274 Score = 84.2 bits (92), Expect = 6e-12 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27507 TTTCTCACGGCGCTCAATGGGTTTCAGCTATCATTGATGCAATGGCTAGATTTGTTTCAG 27566 ||||| || || |||||||| |||| || | ||| ||| ||| || || || Sbjct 1 TTTCTGGTGGAGCGCAATGGGTATCAGGAATTGTCAGTGCCATGTCTAATTTCGTGTCTA 60 Query 27567 GTGTAATTAGCGGTTTTGTCAATGTGATTGGCCAAGTCAAAAGTGGTATGTCACGTGCTG 27626 | || ||||| |||||||| |||| || |||||| || || ||| ||||||| Sbjct 61 GCGTGATTAGTGGTTTTGTTAATGCTGTTTCACAAGTCCAATCCGGAATGCAACGTGCTT 120 Query 27627 TTGCTGCTATTAGAGGATTTTTAGGACAATTTGTTAGTGCCGGAATTCAAATGATGGCTG 27686 | | ||| || ||| | || ||||||| |||||||||||| | | ||| || Sbjct 121 ATAGCACAATTGTTGGTTTTGTCGGCCAATTTGCTAGTGCCGGAATGGATTTAATGCGTG 180 Query 27687 GTTTAGCTCGAGGTATTATGAGTGGA 27712 |||||| || |||||| |||| |||| Sbjct 181 GTTTAGTTCAAGGTATCATGAATGGA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128070455990092