Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq867 196 1e-44 seq39 185 3e-41 seq13 167 7e-36 seq891 134 4e-26 seq851 104 7e-17 seq1283 100 9e-16 seq1026 98.7 3e-15 seq633 98.7 3e-15 seq864 95.1 4e-14 seq1103 89.7 2e-12 >seq867 Length=18020 Score = 196 bits (216), Expect = 1e-44 Identities = 489/736 (66%), Gaps = 15/736 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || ||||| || ||||| || || ||||| || ||| | | | |||| | Sbjct 13083 CCGCTGTTGGTATCGACTTGGGTACCACGTACTCTTGCGTGGCTATCTATCGCGATGACC 13024 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | ||||| ||| | ||||| || |||||| |||| || ||||| | || ||||| | Sbjct 13023 GATGCGAAATTATTCCCAATGAGCAGGGTAACCGAACTACCCCATCTTTTGTCGCATTCA 12964 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 || || |||||| ||||||| ||| |||| || ||||| | ||| || || | | Sbjct 12963 ATGACACCGAGCGTCTGATTGGCGATGCTGCCAAGAATCAGGTCGCTATGAACCCTCACA 12904 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA--- 349432 | || || || || || ||||| | ||||| | ||||| ||| | || | | Sbjct 12903 ACACCGTCTTCGACGCCAAGCGTTTGATTGGCCGCAAGTTC----GACGA-TCCAGAGGT 12849 Query 349433 -CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAAT 349491 || ||||| | || || ||||| || | || || |||| | || ||||| | Sbjct 12848 CCAGGCTGATATGAAGCACTTTCCCTTCAAGGTGATTGAAAAACAAGGC---AAACCTTT 12792 Query 349492 TATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAAT 349551 | |||| |||| ||||| ||| | || |||| ||| || ||||| || || || Sbjct 12791 GGTCAAGGTCGAATTCAAAGGCGAAGAGAAGGAATTCACACCTGAGGAAATATCTTCCAT 12732 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGC 349611 | | | | || ||| || ||||| || | | ||| || | | || | | || Sbjct 12731 GATCCTCATCAAGATGCGCGAGATTGCCGAGGGCTTTTTGGGCACACCGGTCCCGAACGC 12672 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 ||| | ||||| || ||||| || || || | ||||| || || || || || || Sbjct 12671 TGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGGCAGGCTACCAAGGACGCCGG 12612 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 | ||||| || | || || || | || || || || || ||||| || || ||||| Sbjct 12611 TCGTATTGCCGGACTCAACGTCCTTCGTATCATCAACGAGCCTACTGCCGCCGCTATTGC 12552 Query 349732 ATATGGGCTTGATAAAATGAGT-GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 || || || || || | ||| || || ||| | || ||||| ||| |||||| Sbjct 12551 CTACGGTCTCGACAAGAA-AGTCGAGGGTGAGCGCAATGTCCTGATTTTCGATCTAGGTG 12493 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 ||||||| || ||||| || || || ||| |||| ||||| || || || || || | | Sbjct 12492 GTGGTACCTTCGATGTGTCTCTCCTCACAATTGAGGAGGGTATCTTCGAGGTCAAGTCCA 12433 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 | || ||||| || || | ||||| || || || ||||| || || ||| || |||| Sbjct 12432 CCGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGATAACCGCCTTGTTAACCACTTTG 12373 Query 349911 TTAAAGAATTTAAGCG 349926 | || ||||| ||||| Sbjct 12372 TCAACGAATTCAAGCG 12357 Score = 136 bits (150), Expect = 1e-26 Identities = 458/707 (65%), Gaps = 11/707 (2%) Strand=Plus/Minus Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 ||||||| || | ||||| || |||||||| ||||| || | || ||| | | || | Sbjct 12263 TGCGTCGTCTCCGTACTGCTTGCGAACGTGCCAAGCGCACCCTCTCTTCTGCAGCTCAGA 12204 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 | | ||||| ||||| || || || || | ||||||| | ||||||| || | Sbjct 12203 CTACGATTGAGATTGACTCCCTATTCGAGGGTATCGATTTCTACACCCCTATTACCCGGG 12144 Query 350085 CTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 | || || ||||| | || ||||||||| || | || || | ||||| || | Sbjct 12143 CCCGTTTCGAAGAGCTTTGCCAGGATCTTTTCCGATCCACCATCCAGCCTGTCGACCGTG 12084 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | | | || || || || |||| ||| || |||| | || || |||||||||| Sbjct 12083 TTCTCACTGACGCCAAGATTGACAAATCTCAAGTTCATGAGATTGTCTTGGTTGGTGGTT 12024 Query 350205 CTACACGTATTCCAAAAGT-TCAACAGTTACT-ATCT--GAGTTTTTTAATGGCAAAGAA 350260 | || || ||||| || || ||| ||| |||| || | || || |||||||| Sbjct 12023 CCACCCGAATTCC--CCGTATC--CAGAAACTCATCTCCGACTACTTCAACGGCAAAGAG 11968 Query 350261 CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCT 350320 || | || || || || ||||| |||||||| || ||||| ||||| ||||| || Sbjct 11967 CCCAACAAGTCTATCAACCCTGATGAGGCTGTTGCGTACGGTGCCGCTGTCCAGGCTGCT 11908 Query 350321 ATTTTATCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACT 350377 || | ||||| | | ||| || | | | || | || | || || || || Sbjct 11907 ATCCTGTCTGGTGACACTTCTTCCAAGTCTACTAACGAAATCTTGTTGCTTGACGTCGCT 11848 Query 350378 CCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAAT 350437 || | || || || | || || | |||| | | ||||| |||||||| | || Sbjct 11847 CCTTTGTCTCTGGGTATCGAGACCGCCGGTGGAATGATGACGAAGCTTATTCCCCGTAAC 11788 Query 350438 AGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCG 350497 | || | || || || |||||| || ||| || || ||| | || || ||||| | | Sbjct 11787 ACAACCATTCCAACCAAGAAGTCCGAAGTTTTCTCGACCTTTTCTGACAACCAGCCTGGG 11728 Query 350498 GTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGA 350557 || || || || ||||| || || || ||||| || || || || | || Sbjct 11727 GTGCTCATCCAGGTCTTTGAGGGCGAGCGACAGCGCACCAAGGACAACAACCTGATGGGC 11668 Query 350558 GAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCT 350617 | ||| || | || ||||| || || | || ||||||||||||||||| | Sbjct 11667 AAGTTTGAGCTTACTGGCATTCCCCCCGCTCCCCGTGGTGTTCCTCAGATTGAAGTTACC 11608 Query 350618 TTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 || ||| | || | |||||||| | ||||| | || |||||||| Sbjct 11607 TTTGATCTCGACGCCAATGGTATCATGAATGTCTCTGCCGTTGAAAA 11561 >seq39 Length=88371 Score = 185 bits (204), Expect = 3e-41 Identities = 182/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | || || | ||| ||||||||||| || |||||||| | Sbjct 30756 TTTGCATACCACCCCGCAGACGCAGGACTAAATGCAGAGTAGACTCCTTCTGAATATTGT 30815 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || ||||| ||||| || || || || ||||||||||| || || ||||| | Sbjct 30816 AGTCGGACAAAGTTCGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGT 30875 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| ||||| ||||| |||| ||||||||||| |||| ||| || | Sbjct 30876 CAGGGGGAATGCCTTCCTTATCTTGAATCTTAGACTTTACATTATCGATCGTATCCGAGG 30935 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| | ||||| ||||| || || | || || || || |||||||| Sbjct 30936 ATTCAACTTCCAATGTAATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 30990 Score = 167 bits (184), Expect = 7e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||||| || ||||| || ||||| || ||||| || | Sbjct 31285 TTTGCATACCACCTCGAAGGCGGAGAACGAGGTGAAGTGTTGACTCCTTCTGAATGTTGT 31344 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || || || || || || |||||||| ||||||||||| ||||| | Sbjct 31345 AATCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATTAGACGCTGCTGGT 31404 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || |||||||| || |||||||| || | || ||||| ||||| | |||||| | Sbjct 31405 CAGGGGGGATTCCTTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATAGTATCAGACG 31464 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||| ||||| || || || || || || ||||| Sbjct 31465 ACTCGACCTCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 31519 Score = 125 bits (138), Expect = 2e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || || ||||| || || ||||| ||||| || || |||||||| |||||||| || Sbjct 30599 GTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAAATAAGTCGTTGCTGGTCAGGAGGGATA 30658 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || || ||||||||||| || | ||| ||||| || || | |||||| | ||| ||||| Sbjct 30659 CCCTCCTTATCCTGAATCTTGGATTTGACATTGTCGATGGTATCAGAAGATTCGACTTCC 30718 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | |||| |||||||| || | || || |||||||| ||||| Sbjct 30719 AAGGTAATAGTCTTTCCAGTCAAGGTCTTGACAAAAATTTGCAT 30762 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || || || ||||| || || Sbjct 30988 CATACCACCACGGAGGCGGAGGACGAGGTGAAGGGTGGATTCCTTCTGGATATTGTAGTC 31047 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| || || || ||||| || || | || ||||||||||| Sbjct 31048 GGAGAGGGTACGGCCATCTTCCAGCTGCTTACCAGCGAAAATCAATCGCTGCTGATCAGG 31107 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || | || ||||| || || | || || | || Sbjct 31108 AGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTC 31167 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||||||||| | || || |||| || ||||| Sbjct 31168 GACCTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACAACTAT-TGCAT 31217 >seq13 Length=129688 Score = 167 bits (184), Expect = 7e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | || || | ||| | ||||||||| || |||||||| | Sbjct 70944 TTTGCATACCACCCCGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGT 71003 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || ||||| ||||| || || || || ||||||||||| || || ||||| | Sbjct 71004 AGTCGGACAAAGTTCGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGT 71063 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| || || ||||| ||||| ||||||||||| || | ||| || | Sbjct 71064 CAGGGGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTTACATTATCGATTGTATCCGAAG 71123 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| | ||| | ||||| || || | || || || || |||||||| Sbjct 71124 ATTCGACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 71178 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || || || ||||| || ||||| || || || || | Sbjct 71473 TTTGCATGCCACCTCGGAGGCGGAGGACGAGGTGAAGGGTTGACTCCTTCTGGATGTTGT 71532 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | |||| | || || || || ||||| || |||||||| ||||| ||||| ||||| | Sbjct 71533 AGTCAGCAAGAGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGT 71592 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||| || ||||||||||| || | || ||||| ||||| | |||||| | Sbjct 71593 CGGGGGGGATTCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATGGTATCAGACG 71652 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||| ||||| || || || || || || ||||| Sbjct 71653 ACTCGACCTCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 71707 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || || || || ||||| || || Sbjct 71176 CATACCACCACGGAGGCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTC 71235 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || |||||||| || || || ||||| ||||| | || ||||||||||| Sbjct 71236 GGCGAGGGTACGACCATCTTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGATCAGG 71295 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| ||||||||||| || | ||| ||||| || || | || || | || Sbjct 71296 AGGAATACCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATGGTGTCGGAGGACTC 71355 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 || || || || | |||||||| || | || || |||| Sbjct 71356 GACCTCGAGGGTGATGGTCTTTCCAGTCAAAGTCTTGACAA 71396 Score = 123 bits (136), Expect = 8e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || |||| | |||| || || || || ||||| || Sbjct 70723 ACCACCACGCAGACGAAGCACGAGATACAAAGTACTTTCCTTCTGGATGTTATAGTCGCT 70782 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || ||||| || || ||||| ||||| || || |||||||| || ||||| Sbjct 70783 CAGCGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAAATAAGTCGTTGCTGGTCGGGAGG 70842 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||| || ||||||||||| || | ||| ||| | || || | |||||| | ||| || Sbjct 70843 GATTCCCTCCTTATCCTGAATCTTGGATTTGACAGTGTCGATGGTATCAGAAGATTCGAC 70902 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| | || | |||||||| || | || || |||||||| ||||| Sbjct 70903 TTCCAAGGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAAATTTGCAT 70950 >seq891 Length=17630 Score = 134 bits (148), Expect = 4e-26 Identities = 452/703 (64%), Gaps = 3/703 (0%) Strand=Plus/Minus Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 ||||||| || | ||||| || |||||||| ||||| || | || ||| | | || | Sbjct 12017 TGCGTCGTCTCCGTACTGCTTGCGAACGTGCCAAGCGCACCCTCTCTTCTGCAGCTCAGA 11958 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 | | ||||| ||||||||||| || || | ||||||| | ||||||| || | Sbjct 11957 CTACGATTGAGATTGATTCTCTATTCGAGGGTATCGATTTCTACACCCCTATTACCCGGG 11898 Query 350085 CTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 | || || ||||| | ||| ||||||||| | | || || | ||||| || | Sbjct 11897 CCCGTTTCGAAGAGCTTTGTCAGGATCTTTTCCGCTCCACCATCCAGCCTGTCGACCGTG 11838 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | | | || || || || |||| ||| || |||| | || || |||||||||| Sbjct 11837 TTCTCACTGACGCCAAGATTGACAAATCTCAAGTTCATGAGATTGTCTTGGTTGGTGGTT 11778 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264 | || |||||||| | | || | | | || || | ||||| || ||||| || Sbjct 11777 CCACCCGTATTCCCCGAATCCAGAAACTCATCTCCGACTACTTTAACGGTAAAGAGCCCA 11718 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | || || || || ||||| ||||| || || ||||| ||||| ||||| |||| Sbjct 11717 ACAAGTCTATCAACCCTGATGAGGCTGTCGCGTACGGTGCCGCTGTCCAGGCTGCTATCC 11658 Query 350325 TATCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 | ||||| | | ||| || | | || | || | || || || | || Sbjct 11657 TGTCTGGTGACACTTCTTCCAAGTCTACCAACGAAATCTTGTTGCTTGACGTCGCGCCTT 11598 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | || || || | || || | |||| | | ||||| || |||||| | || | | Sbjct 11597 TGTCTCTGGGTATTGAGACCGCCGGTGGAATGATGACGAAGCTCATTCCTCGTAACACAA 11538 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 | | || || || ||||| | ||| || || || | || || ||||| | ||| Sbjct 11537 CCATTCCAACCAAGAAGTCTGAGGTTTTCTCGACCTTCTCTGACAACCAGCCCGGGGTGC 11478 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 ||||| || ||||| || || || ||||| || || || || | | || | | Sbjct 11477 TCATTCAGGTCTTTGAGGGCGAGCGACAGCGCACCAAGGACAACAACCTAATGGGCAAGT 11418 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCG 350621 || || | || ||||| || || | || ||||||||||||||||| | || | Sbjct 11417 TTGAGCTTACTGGCATTCCCCCCGCTCCCCGTGGTGTTCCTCAGATTGAAGTTACCTTTG 11358 Query 350622 ATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 || | ||| | |||||||| | ||||| | || ||||| || Sbjct 11357 ATCTCGATGCCAATGGTATCATGAATGTGTCTGCTGTTGAGAA 11315 >seq851 Length=18443 Score = 104 bits (114), Expect = 7e-17 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 ||||| ||||| ||||| || || ||||| | ||| |||| |||||||||||| |||||| Sbjct 17762 ACACCGGCAAAATGGAACGTGTTCAGAGTCATTTGCGTAGCGGGCTCACCAATAGACTGC 17703 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAA 377590 ||||| | |||||| |||||||| ||||| |||||| Sbjct 17702 GCTGCCAGAACGCCGACCATTTCACCAGGGCTGACAA 17666 >seq1283 Length=10397 Score = 100 bits (110), Expect = 9e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || || || ||| || || || || || || Sbjct 2765 ACCACCACGAAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 2706 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || || ||||| || || || || ||||||||||| || |||||||| || || || Sbjct 2705 CAAGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGTTGCTGGTCCGGGGG 2646 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || | || || || || || | || || | || || Sbjct 2645 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 2586 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || ||||| || ||||||||||| Sbjct 2585 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTTTTGACGAAAATCTGCAT 2538 >seq1026 Length=14805 Score = 98.7 bits (108), Expect = 3e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 ||||| ||||| ||||| || || ||||| | ||| || | |||||||||||| |||||| Sbjct 14124 ACACCGGCAAAATGGAACGTGTTCAGAGTCATTTGCGTGGCGGGCTCACCAATAGACTGC 14065 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAA 377590 ||||| | |||||| |||||||| ||||| |||||| Sbjct 14064 GCTGCCAGAACGCCGACCATTTCACCAGGGCTGACAA 14028 >seq633 Length=24846 Score = 98.7 bits (108), Expect = 3e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || ||||| || || || || ||||||||||| || |||||||| || || ||||| Sbjct 19986 GTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGTTGCTGGTCCGGGGGAATG 20045 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || || || ||||| || || | || || || || || | || || | || || ||| Sbjct 20046 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCA 20105 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | ||||| || || || ||||| || ||||||||||| Sbjct 20106 AGGGTGATCGTCTTCCCCGTGAGGGTTTTGACGAAAATCTGCAT 20149 >seq864 Length=18104 Score = 95.1 bits (104), Expect = 4e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || ||||| || || || || | ||||| || || ||||| || || ||||| ||||| Sbjct 8492 TTCTGAATGTTGTAGTCGGACAGGGTTCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATC 8433 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || ||||||||||| ||||| || || || || || ||||| | || ||||| || Sbjct 8432 AATCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGGATTTTGGACTTGACATTGTCG 8373 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| || || | || || ||||| || | ||||| || || || || || || ||| Sbjct 8372 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAA 8313 >seq1103 Length=13553 Score = 89.7 bits (98), Expect = 2e-12 Identities = 162/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 || || || ||||| || ||||| || | || || || |||| | || ||||| Sbjct 8417 GCTACCAAGGATGCCGGTGTTATTGCCGGTCTCAACGTCCTCCGAATTGTCAACGAACCT 8358 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAA-TGAGTGACCAAGaaaaaaaTATTCT 349773 ||||| || || || || || || || || || | |||| | | || | |||| | Sbjct 8357 ACTGCCGCCGCTATCGCTTACGGTCTAGACAAGACTGAGGG--CGAGCGACAAATCAT-- 8302 Query 349774 TATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAAT 349833 | | | ||| | ||||||||||| || ||||| ||||| || | |||| |||| | Sbjct 8301 TGTCTACGATCTTGGTGGTGGTACCTTCGATGTCTCACTTCTGTCCATTGACCAGGGTGT 8242 Query 349834 TTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||| || ||| || ||||||||||| || |||||||| || |||||||| || Sbjct 8241 TTTCGAGGTTTTGGCTACTGCTGGTGACACTCATCTTGGCGGTGAAGATTTCGA 8188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514805893220906