Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20uncinata_20[genbank_20GCA_5F001043855.1_202015-06-30] 23,102 sequences; 53,344,113 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq11171 185 9e-42 >seq11171 Length=347 Score = 185 bits (204), Expect = 9e-42 Identities = 127/142 (89%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 8475 CCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTC 8534 |||| |||| |||||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 15 CCAA-CTAACTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTAGTC 73 Query 8535 TCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAG 8594 | ||||||||||||||| ||||||||||| |||| || ||||||||||||| |||| ||| Sbjct 74 TTGAACTCCTGACCTCAGGTGATCCACCTACCTCAGCTTCCCAAAGTGCTGAGATTGCAG 133 Query 8595 GCATGAGCCACCGCGCCTGGCC 8616 |||||||||||| | ||||||| Sbjct 134 GCATGAGCCACCACACCTGGCC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521337407302800