Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq19 84.2 2e-11 >seq19 Length=853957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| || |||| || ||||| | | || | |||||| || ||||| ||| Sbjct 675943 CAAGCAAAGTCTGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTGAGA 676002 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || || || | ||| || || | || || |||||| ||||| Sbjct 676003 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGAACCACTGAAGAAG 676062 Query 16355 ATACCTTCAACTGCGGCAAATGCAAC 16380 ||||||||||| ||||| || ||||| Sbjct 676063 ATACCTTCAACGGCGGCGAAAGCAAC 676088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510687622200