Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 2e-14 >seq3 Length=2655511 Score = 95.1 bits (104), Expect = 2e-14 Identities = 182/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAGTATCAT 94837 || || ||| | || ||||||||||||||||| | || || | ||| || || || | Sbjct 1394059 GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCAACGC-GCATGTCTTGAGTGTGTCGT 1394001 Query 94838 AAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTG 94897 | |||||||||||||| || || | | | | | |||||||| || || | || || | Sbjct 1394000 AGATACCCTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGTGGGG 1393941 Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957 ||| ||| || || || || || || || || || || || | | ||||||| Sbjct 1393940 ACGGTGTACCAGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTCTGCGACATGT 1393881 Query 94958 GATCATATGTTTCAATGACAGATTTGATGTCTGATCC--GTGAATGCCGACAGCCACACG 95015 || ||||| || || | | |||||| ||| ||| ||||| ||||| ||||| Sbjct 1393880 AGTCGTATGTCTCGATAGCCTTCTCGATGTC--CTCCATGTGGATGCCAACAGCGACACG 1393823 Query 95016 CATAATCATGTCCTGAGGGCGCTC 95039 ||| | ||||| ||| |||||||| Sbjct 1393822 CATGAGCATGTGCTGGGGGCGCTC 1393799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581121856785