Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq19 87.8 1e-12 >seq19 Length=853957 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 22730 CTATCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCAT 22789 || |||| | |||||| | || || || || |||||||| || | || ||| || | Sbjct 676105 CTTTCGCCAACCGTCTCGTTGCTTTCGCCGCCGTTGAAGGTATCTTCTTCAGTGGTTCGT 676046 Query 22790 TTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACG 22849 | ||| |||| |||||||||||||| ||| |||||||| || | | || ||||||| Sbjct 676045 TCGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTCACATTCTCCAACG 675986 Query 22850 AGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 || | || |||||||| || | ||| ||||||||||| Sbjct 675985 AGCTCATCTCTCGTGACGAGGGCATGCACACAGACTTTGCTTG 675943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232614457481