Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=4966325 Score = 102 bits (112), Expect = 8e-17 Identities = 168/241 (70%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 139525 ACCGCGGACATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAAT 139584 ||||| || || || || || | ||| | ||| | ||||| || ||||| || || || Sbjct 2851161 ACCGCTTAC-TGTCCACCACGCAGACGAAGAACCAGGTGAAGTGTCGACTCCTTCTGGAT 2851219 Query 139585 GTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTG 139644 ||| |||||| | |||| | |||||| ||||| ||||| ||| |||| ||||| || Sbjct 2851220 GTTGTAATCGGAAAGCGTGCGCCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGACGCTG 2851279 Query 139645 CTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTC 139704 ||| || || || || || || || || ||| || || | | || | ||||| Sbjct 2851280 CTGGTCAGGTGGGATACCCTCCTTATCCTGGATCTTAGACTTGACGTTGTCGATCGTGTC 2851339 Query 139705 GGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | | | ||| ||||| | || | ||||||||||| | || || ||||| |||||||| Sbjct 2851340 GCTAGACTCAACCTCCAATGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 2851399 Query 139765 A 139765 | Sbjct 2851400 A 2851400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062592418400