Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 >seq1 Length=4966325 Score = 89.7 bits (98), Expect = 5e-13 Identities = 165/241 (68%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 142945 ACCGCGGACATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTAT 143004 ||||| || || || || || | ||| | ||| | |||| ||| || || || || || Sbjct 2851161 ACCGCTTAC-TGTCCACCACGCAGACGAAGAACCAGGTGAAGTGTCGACTCCTTCTGGAT 2851219 Query 143005 GTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTG 143064 |||||||||| | |||| | |||||| || || ||||| ||| |||| ||||| || Sbjct 2851220 GTTGTAATCGGAAAGCGTGCGCCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGACGCTG 2851279 Query 143065 CTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTC 143124 ||| || || || || || || || || || || || | | || | |||||| Sbjct 2851280 CTGGTCAGGTGGGATACCCTCCTTATCCTGGATCTTAGACTTGACGTTGTCGATCGTGTC 2851339 Query 143125 CGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | | || || || | || | ||||||||||| | ||| || ||||| |||||||| Sbjct 2851340 GCTAGACTCAACCTCCAATGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 2851399 Query 143185 A 143185 | Sbjct 2851400 A 2851400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012961346640