Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 5e-13 >seq19 Length=853957 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || |||||||| |||| || ||||| | Sbjct 675654 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTC 675713 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || |||| | |||||| || ||| | | |||| || Sbjct 675714 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTGGGGTTGCCAAGAGCCAACAGTAG 675773 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG 119795 ||||| || || ||||||||||| | ||||||| Sbjct 675774 GCGATCAGCGACGAACTCGATGTACTGGCACATG 675807 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| | ||| ||| || ||| | |||| ||||||||| || ||||| ||||| Sbjct 676372 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAAGGCGAGGACGTGGG 676431 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || || || || | ||||| || |||||||| |||| | ||||||||| | Sbjct 676432 AGATGAAGAAACGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGGATGTCCTTGGAGA 676491 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||||||||||| | ||||| | || | | || ||||||||| |||||||| Sbjct 676492 GATCGATCTCTTCTGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGA 676548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661041795440