Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 354 2e-92 >seq3 Length=2655511 Score = 354 bits (392), Expect = 2e-92 Identities = 1162/1785 (65%), Gaps = 32/1785 (2%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||||| ||||| ||||| || || || || ||||| || | ||| || Sbjct 1393742 TTCGGATTCAAGACATTGGAGCGCTCATATCTGCTCCGCATCAACGGCAAGGTTGCCGAG 1393801 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| ||||| ||| | |||||||| ||| |||| ||||| ||| | || Sbjct 1393802 CGCCCCCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATCGAGAAG 1393861 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || || || ||||| | || | | || || ||| ||||| ||||| |||| || Sbjct 1393862 GCTATCGAGACATACGA-CTAC-ATGTCGCAGAAGTACTTCACACACGCGTCGCCGACGC 1393919 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| ||||| || | ||||||||||| || ||||| || | | ||||||| Sbjct 1393920 TCTTCAACGCTGGTACACCGTCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGG 1393979 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||| |||||||||| |||||||| |||| || || | || ||||||| || Sbjct 1393980 AAGACAGCATTGAGGGTATCTACGACACACTCAAGACATGCGCGTTGATCTCCAAGACTG 1394039 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | ||||| ||||| | | || ||||| ||||||| || | | || || | || Sbjct 1394040 CTGGCGGTATTGGCCTCAACG-TCCACCGCATTCGTGCCACTGG-CTCCTATATCGGAGG 1394097 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || ||| ||||| || ||| |||||||||| ||||| | |||| ||||| | Sbjct 1394098 AACCAACGGAACATCGAACGGTCTGATTCCCATGCTCCGTGTTTACAACAACACTGCCCG 1394157 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || |||||||||||||| |||||| || || ||||| || || |||||||| Sbjct 1394158 CTATGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCATTTGCCATCTACCTCGAGCCGTG 1394217 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || || || | || | || || || || |||| ||| || || ||||| | || Sbjct 1394218 GCACGCTGACGTCTTCGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG 1394277 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT---GGA 363983 ||| || ||||| ||||| || || ||| || | || | |||||| |||| || ||| Sbjct 1394278 TGCTCGCGATCTCTTCTACGCTCTGTGGATTCCCGATCTCTTTATGCAGCGTGTCCAGGA 1394337 Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | || || ||| | ||| | ||||| |||| || || || || | || || | Sbjct 1394338 GAACGGCGAG---TGGACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTTTA 1394394 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || || || | ||||| || ||||| ||||| || | || |||| |||| |||| Sbjct 1394395 CGGCGATGAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGCTTGGTAAGGGTCGTGAGAC 1394454 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 | | || |||||||| |||| ||||| | || | |||| ||||| || | || Sbjct 1394455 TGTCCGTGCTCAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCC 1394514 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 || ||| | ||||| ||| | |||| | ||| ||||||| || |||| ||||| | Sbjct 1394515 CTTCATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCA- 1394573 Query 364224 TCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || |||| |||||| || || ||||| || |||||||| || || || ||| || | Sbjct 1394574 TCCGCAGCTCCAACCTCTGCACTGAGATCATCGAATACACTGCACCGGATGAGGTCGCTG 1394633 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAG-ATGGTACTTTTG 364336 | || ||||| || || |||| ||||| | || | || ||| || || | Sbjct 1394634 TCTGCAACCTGGCTTCCGTCGCTCTTCCCTCTTTCGTCGATTACAAGCGCGGAGAGTTCG 1394693 Query 364337 ACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTAT 364394 | | || | ||| | || || | | || ||| || |||| ||| ||||| | || Sbjct 1394694 ATTTCAAGAAGCTTCACGAGGTCGTCCAGGTC-TGC-ACACGCAACCTCAACAAGATCAT 1394751 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 ||| ||| | || ||| || || || || || | ||||| | || || Sbjct 1394752 CGAGGTCAATCACTACCCAGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACAGGCCTAT 1394811 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 |||||||||||| ||||| || ||||||| ||| | || || | || || || Sbjct 1394812 TGGTCTTGGTGTCCAGGGTCTTGCTGACGCTTTCCTCGCTCTTCGCCTGCCCTTCGAGTC 1394871 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 |||||| ||| || || | ||||||| || || || || ||||| |||| Sbjct 1394872 GCCTGAGGCTAAGAAACTCAACACCCAGATCTTCGAGACTATCTACCACGCCGCCTTGAC 1394931 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 |||| || || ||| || || || |||| || ||||| |||||| | Sbjct 1394932 CTCTTCTTGCGAGACGGCTAAGGAGTTTGGCCCCTATACTACGTACGAGGGCTCCCCTGT 1394991 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 |||||||| | | |||| || | ||| ||||| || ||| || ||| |||| Sbjct 1394992 CTCGCAGGGCCAGCTTCAGTACGACATGTGGGGCGTCACACCCACTGACCTCTGGGACTG 1395051 Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCGTTACAGC 364751 || |||| || || || | ||| ||||| || |||||| || Sbjct 1395052 GGCCTCGCTGAAGGAGAAGATTGCACAGTACGGTGTCCGCAATTCTCTGCTCGTT---GC 1395108 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 ||| ||||| || || ||||| | ||||| || || ||||||||||||||||| || | Sbjct 1395109 GCCTATGCCTACAGCCTCTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTA 1395168 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || || |||| || || || || || | ||||| || | ||| || || | Sbjct 1395169 CACCTCGAACATTTACTCTCGTCGTGTGCTCGCTGGAGAGTTCCAGGTTGTCAACCCTTG 1395228 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 | ||||||| ||| |||| || || ||| || | |||||||||| ||||| Sbjct 1395229 GTTGCTCAAGGACCTTGTCGACATGGGTCTCTGGACCGAGAACATGAAGAACCGCATCAT 1395288 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 |||| ||| || | ||| ||| || |||| || || | ||| | | || Sbjct 1395289 TGCCGAGGGTGGATCCATCCAGCGCATCCCTAACATTCCTGACGAGATCAAGGTTCTCTA 1395348 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| || || |||||||| || ||| || |||| | ||||| || || || ||||| Sbjct 1395349 CAAGACTGTCTGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGTGGTGC 1395408 Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111 || ||| |||| ||||| | ||| | ||||| |||| || | |||| | Sbjct 1395409 CTTCATCGATCAGTCTCAGTCTCTGAACATCCACATGAAGGAGCCTACTATGGGCAAGAT 1395468 Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||||||||| ||| || ||||| || || ||||| || Sbjct 1395469 CACATCCATGCACTTCGCTGGATGGAAGCTTGGCCTCAAGACCGG 1395513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349809277514