Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 205 1e-47 seq19 114 2e-20 >seq3 Length=2655511 Score = 205 bits (226), Expect = 1e-47 Identities = 1110/1751 (63%), Gaps = 39/1751 (2%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 ||| | | ||||||||||||||| || |||||||| || ||||||| || | ||| Sbjct 1395537 GCCATGGTTCGGAGGTAGTACATTCCGGTCTTGAGGCCAAGCTTCCATCCAGCGAAGTGC 1395478 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | | |||| | || || | |||| || ||||| | || || ||| Sbjct 1395477 ATGGATGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGAGACTGAGACTGA 1395418 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 113767 ||||||||| ||||| || || ||||| | || | | | ||||||||| Sbjct 1395417 TCGATGAAGGCACCACGGTCAGCAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCAG 1395358 Query 113768 ACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCA 113827 ||||| ||||||| ||| || || || || || | ||| |||||||| ||| Sbjct 1395357 ACAGTCTTGTAGAGAACCTTGATCTCGTCAGGAATGTTAGGGATGCGCTGGATGGATCCA 1395298 Query 113828 CCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCC 113887 ||| | | ||| | | |||||| | || | ||||||||| || | || ||| Sbjct 1395297 CCCTCGGCAATGATGCGGTTCTTCATGTTCTCGGTCCAGAGACCCATGTCGACAAGGTCC 1395238 Query 113888 TCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TA 113943 | ||| | | |||||||| ||||| || ||||| || | ||| || Sbjct 1395237 TT---GAGCAACCAAGGGTTGACAACCTGGAACTCTCCAGCGAGCACACGACG-AGAGTA 1395182 Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGC 114003 || || | ||||| ||||| |||||||| ||||| || | || || | ||| ||||| Sbjct 1395181 AATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTAGAGGC 1395122 Query 114004 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 114063 ||| ||||| || || | ||| || || |||| ||| | | ||| ||||| Sbjct 1395121 TGTAGGCATAGGCGCAACGAGCAGAGAATTGCGGACACCGTACTGTGCAATCTTCTCCTT 1395062 Query 114064 GAGGGCGTCCCAGTCGTAGTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121 || | | ||||||| || | || | || | | | |||||| || |||| || Sbjct 1395061 CAGCGAGGCCCAGTCCCAGAGGTCAG-TGGGTGTGACGCC-CCACATGTCGTACTGAAGC 1395004 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC---GCC 114178 || || ||| | || || ||||| | || || ||||| || |||| ||| Sbjct 1395003 TGGCCCTGCGAGACAGGGGAGCCCTCGTACGTAGTATAGGGGCC---AAACTCCTTAGCC 1394947 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238 ||| | | | ||| ||||| || || ||||| || || | | || | | Sbjct 1394946 GTCTCGCAAGAAGAGGTCAAGGCGGCGTGGTAGATAGTCTCGAAGATCTGGGTGTTGAGT 1394887 Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298 ||| ||||| || || || | || || | || | || || ||||| Sbjct 1394886 TTCTTAGCCTCAGGCGACTCGAAGGGCAGGCGAAGAGCGAGGAAAGCGTCAGCAAGACCC 1394827 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 114358 |||||||| || ||||| || | || | | || || || ||| || || Sbjct 1394826 TGGACACCAAGACCAATAGGCCTGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACTGGG 1394767 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 || ||| ||||| | | | || || || ||| |||| || || ||| Sbjct 1394766 TAGTGATTGACCTCGATGATCTTGTTGAGGTTGCGTGTGCAGACCTGGACGACCTCGTGA 1394707 Query 114419 AGCTTTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477 ||||| | | |||| || || || | || | || ||| | ||||| |||| || Sbjct 1394706 AGCTTCTTGAAATCGAACTCTCCGCG-CTTGTAATCGACGAAAGAGGGAAGAGCGACGGA 1394648 Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537 ||||| || || |||| | ||||||| ||||||| || || || || || || | Sbjct 1394647 AGCCAGGTTGCAGACAGCGACCTCATCCGGTGCAGTGTATTCGATGATCTCAGTGCAGAG 1394588 Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597 || || || ||||| || | |||||| || || ||| |||| |||||||| Sbjct 1394587 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCAGCATCCTT 1394528 Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 114656 ||| |||||| | || | || ||||| || || | || ||||| || | ||||| | | Sbjct 1394527 GTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATGGCGTACCAGAGCTT 1394468 Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | | | || ||||| | | || || ||||||||| ||| ||||| Sbjct 1394467 CTGAGCACGG-ACAGTCTCACGACCCTTACCAAGCTTCTCGTACTTCTCGTAAAGGGCAA 1394409 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776 | ||||| || || | || | ||| || || || | ||||| | ||||| || Sbjct 1394408 CGAACTCATCGCCGTAAACGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGAGTCC 1394349 Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836 | | || ||||| ||||||| ||| ||||| || || ||||| ||||| |||||| Sbjct 1394348 ACTCGCCGTTCTCCTGGACACGCTGCATAAAGAGATCGGGAATCCACAGAGCGTAGAAGA 1394289 Query 114837 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 114896 |||| ||| ||| | || || | || || || | || || | ||| | | || Sbjct 1394288 GATCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCGAGGAAGCCGAAGA 1394229 Query 114897 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAG 114950 || ||||||||||| || ||||| | || | || || | | || ||| Sbjct 1394228 CGTCAGCGTGCCACGGCTCGAGGTAGATGGCAAATGCACC---AGGGCGCTTGTTGCCAC 1394172 Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010 |||||| ||||| | || ||| || | || || ||||| ||||| | ||| | | Sbjct 1394171 CCTGGTCGACATAGCGGGCAGTGTTGTTGTAAACACGGAGCATGGGAATCAGACCGTTCG 1394112 Query 115011 ATTGGCCATTTGTCCC-CCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCAT 115068 || || || || || |||| ||| ||| | | |||| | | |||| || | Sbjct 1394111 ATGTTCCGTTGGTTCCTCCGATATAGGAGCC--AGTGGCACGAATGCGGTGGACGTTGAG 1394054 Query 115069 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 115128 |||||||| || || ||| ||||| |||||| | |||| || ||||||| || Sbjct 1394053 GCCAATACCGCCAGCAGTCTTGGAGATCAACGCGCATGTCTTGAGTGTGTCGTAGATACC 1393994 Query 115129 GTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 115188 || || ||| |||| | |||| ||||||||| ||||| ||||| ||||| Sbjct 1393993 CTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGTGGGGACGGTGT 1393934 Query 115189 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGT 115247 ||||||||||||||| || || | |||||| |||| ||| | || ||||| | |||| Sbjct 1393933 ACCAGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGT 1393875 Query 115248 AGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAAC 115306 | ||||| | || | | | ||||| ||| ||| || || | | ||| ||||| | | Sbjct 1393874 ATGTCTCGATAGCCTTCTCG-ATGTCCTCCATGTGGATGCCAACAGCGACACGCATGAGC 1393816 Query 115307 ATGTATTGGGG 115317 |||| ||||| Sbjct 1393815 ATGTGCTGGGG 1393805 >seq19 Length=853957 Score = 114 bits (126), Expect = 2e-20 Identities = 293/442 (66%), Gaps = 8/442 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| ||||| ||||||||||||||||| ||||| || | |||| ||| ||||||| Sbjct 675657 GTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGC-AAGCGAGATGTTCTCCA 675715 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGAC 125876 | || || || ||||| | | ||| | | || |||| || || | Sbjct 675716 TGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTGGGGTTGCCAAGAGCCAACAGTAGGC 675775 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | |||| |||| ||||||| |||| | | |||||| |||| || || Sbjct 675776 GATCAGCGACGAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAGCAGCGCAC 675835 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | ||||| ||||| | | |||| ||| ||| ||| ||||| || | ||| || Sbjct 675836 AAGGGAGGGCGTCAGACAGGAACTCCTGCTCGATTGTGACGGCCTCGGTGATGATAGCTG 675895 Query 125997 GAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053 | | || | || | |||| ||| || |||||| ||||| | Sbjct 675896 CGACAGCCTCTTTGCTTGGGCGGTTATTCAGCAGAGA---GAAGAGAAGGCAAGCAAAGT 675952 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 || ||| | ||||||||||| |||||||| || || ||||| || || ||||||| Sbjct 675953 CTGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTGAGACCGGGCATGA 676012 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 |||| |||||||||| |||||| || | || ||||| ||||||||| || || | Sbjct 676013 GACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGAACCACTGAAGAAGATACCTTCAA 676072 Query 126174 CACACGCGAACGCAAAGAGACG 126195 | ||||| |||| |||||| Sbjct 676073 CGGCGGCGAAAGCAACGAGACG 676094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351905009160