Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 9e-14 >seq1 Length=4966325 Score = 95.1 bits (104), Expect = 9e-14 Identities = 195/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || || |||||||| ||||| | ||||| || | || | | || Sbjct 2691392 ACGAGACGGTTGTCGAAGTCTTCACCACCCAAGTGAGTATCACCGGCGGTGGACTTGACC 2691333 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || ||||| | | ||| || | ||||| || ||||| |||| || Sbjct 2691332 TCAAAGATACCCTCTTCGATGGTCAAGAGGGAAACATCGAATGTACCACCTCCCAAGTCG 2691273 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || |||||||| || |||| ||||||| Sbjct 2691272 AAGATGAGGACGTTGCGCTCACCCTCGGTCTTCTTGTCAAGACCGTAGGCAATAGCAGCA 2691213 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || || | | || ||||| || ||||| || ||||| ||| Sbjct 2691212 GCAGTGGGCTCGTTGATGATACGGAGGACGTTAAGGCCGGCAATGAGACCAGCATCCTTA 2691153 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || | ||| || ||||| || || |||||||| || | ||||| Sbjct 2691152 GTAGCCTGACGTTGCGAGTCGTTGAAGTAGGCAGGAACTGTGACGACGGC 2691103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780811135512262