Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 251 9e-62 seq19 122 1e-22 >seq3 Length=2655511 Score = 251 bits (278), Expect = 9e-62 Identities = 1124/1752 (64%), Gaps = 39/1752 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| | || ||||| ||| || || || | Sbjct 1393804 CCCCCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATCGAGAAGGC 1393863 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | | |||||||||||| | ||||| | | ||| |||| ||||| | || || |||| Sbjct 1393864 TATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCGTCGCCGACGCTCT 1393922 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 |||||||||||||||| || || ||||| || ||||| || | | ||||| | Sbjct 1393923 TCAACGCTGGTACACCGTCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGGAAG 1393982 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || | || || |||| ||| |||| ||| || ||||| ||| |||| Sbjct 1393983 ACAGCATTGAGGGTATCTACGACACACTCAAGACATGCGCGTTGATCTCCAAGACTGCTG 1394042 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 | ||||| || | || |||| | | |||| || ||| |||| || | Sbjct 1394043 GCGGTATTGGCCTCAACGTCCACCGCATTCGTGCCACTGGCTCCTATATCGGAGGAACCA 1394102 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || ||| | ||| | ||||| ||||| || || | ||| ||| || ||||||| Sbjct 1394103 ACGGAACATCGAACGGTCTGATTCCCATGCTCCGTGTTTACAACAACACTGCCCGCTATG 1394162 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | ||| ||| || | | || |||| || ||||| ||||||| Sbjct 1394163 TCGACCAGGGTGGCAACAAGCGCCCTGGTGCATTTGCCATCTACCTCGAGCCGTGGCACG 1394222 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 | || || | | ||||| || || | ||||| || | ||||||| || ||| Sbjct 1394223 CTGACGTCTTCGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG-TGCT 1394281 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 ||||||||||||| |||||| |||||||| |||||||| ||| || | || |||||| Sbjct 1394282 CGCGATCTCTTCTACGCTCTGTGGATTCCCGATCTCTTTATGCAGCGTGTCCAGGAGAAC 1394341 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205 ||| | ||| ||||| | || || || || ||||| ||| | || | || || Sbjct 1394342 GGCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTTTACGGCGAT 1394401 Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGA----AGAAAGTCGGGCGACTGCGACGGT 112261 ||||| | ||||| ||| ||||||||| | | ||| || || || ||| || Sbjct 1394402 GAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGCTTGGTAAG--GGTCG--TGAGACTGT 1394457 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | || | | ||| | || ||||| || |||| ||||||||||||| || | Sbjct 1394458 CCGTGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCCCT 1394516 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || || ||| ||||| || || ||||| | ||| ||| Sbjct 1394517 TCATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCATCC 1394576 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || ||||||||||| || || ||| | |||| || | |||||| ||||| | Sbjct 1394577 GCAGCTCCAACCTCTGCACTGAGATCATCGAATACACTGCACCGGATGAGGTCGCTGTCT 1394636 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGA 112498 | ||||| || || ||||||| ||| | || ||| | || | | ||| || || Sbjct 1394637 GCAACCTGGCTTCCGTCGCTCTTCCCTCTTTCGTCGATTACAAGCG-CGGAGA-GTTCGA 1394694 Query 112499 TTATGAAAAACTCCACGAAGT-TACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 || | || || ||||| || | | ||| |||| ||||| |||| | || | Sbjct 1394695 TTTCAAGAAGCTTCACGAGGTCGTCCAGGTCTG-CACACGCAACCTCAACAAGATCATCG 1394753 Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 | ||| ||||| |||||| || || || | | ||| | || |||| Sbjct 1394754 AGGTCAATCACTACCCAGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACAGGCCTATTG 1394813 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 |||| |||||||| ||||| || || | ||| | | ||||| | || || || Sbjct 1394814 GTCTTGGTGTCCAGGGTCTTGCTGACGCTTTCCTCGCTCTTCGCCTGCCCTTCGAGTCGC 1394873 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-G 112736 || || ||| || |||| | | || || ||||| || || |||||||| ||||| Sbjct 1394874 CTGAGGCTAAGAAACTCAACACCCAGATCTTCGAGACTATCTACCACGCCGC-CTTGACC 1394932 Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796 | || ||| ||| ||| ||| || ||| || | ||||| || || | Sbjct 1394933 TCTTCTTGCGAGACGGCTAAGGAGTTTGGCCCCTATACTACGTACGAGGGCTCCCCTGTC 1394992 Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 112854 || || || |||||| | || ||||||| || | ||| | || | || |||| Sbjct 1394993 TCGCAGGGCCAGCTTCAGTACGACATGTGGG-GCGTCACACCCA-CTGACCTCTGGGACT 1395050 Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914 ||| | | || ||||| || || | ||| | || || ||| | | || | Sbjct 1395051 GGGCCTCGCTGAAGGAGAAGATTGCACAGTACGGTGTCCGCAATTCTCTGCTCGTTGCGC 1395110 Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974 | ||||| |||||||| ||| | || || | || || || || ||||| || ||||||| Sbjct 1395111 CTATGCCTACAGCCTCTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACA 1395170 Query 112975 CGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 113033 | ||||||| || ||| | | ||||| |||||||| | |||||||| | | Sbjct 1395171 CCTCGAACATTTACTCT-CGTCGTGTGCTCGCTGGAGAGTTCCAGGTTGTCAAC---CCT 1395226 Query 113034 CTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089 | || | | ||||| || || ||||||||| || || | |||||| | | ||| Sbjct 1395227 -TGGTTGCTCAAGGACCTTGTCGACATGGGTCTCTGGACCGAGAACATGAAGAACCGCAT 1395285 Query 113090 GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTT 113149 | | |||||| ||||| || || | ||||| || || || ||| | Sbjct 1395286 CATTGCCGAGGGTGGATCCATCCAGCGCATCCCTAACATTCCTGACGAGATCAAGGTTCT 1395345 Query 113150 GTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGG 113209 ||| || || ||||||||| | | |||| | ||||| || || ||||| Sbjct 1395346 CTACAAGACTGTCTGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGTGG 1395405 Query 113210 TCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAA 113269 | |||||| ||||| ||| | |||| | |||| | || || ||| ||| Sbjct 1395406 TGCCTTCATCGATCAGTCTCAGTCTCTGAACATCCACATGAAGGAGCCTACTATGGGCAA 1395465 Query 113270 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 | || | || |||||| | | |||||| || ||||| || || ||||| ||||| Sbjct 1395466 GATCACATCCATGCACTTCGCTGGATGGAAGCTTGGCCTCAAGACCGGAATGTACTACCT 1395525 Query 113330 CCGATCTAAGGC 113341 |||| | | ||| Sbjct 1395526 CCGAACCATGGC 1395537 >seq19 Length=853957 Score = 122 bits (134), Expect = 1e-22 Identities = 106/129 (82%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262 ||||| |||||||||||| |||||| ||| ||| | || | ||||| |||||||| || Sbjct 676073 GTTGAAGGTATCTTCTTCAGTGGTTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGTGG 676015 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 102322 ||||||||| |||||| |||||||||||||| ||||||||||||||||| | ||| Sbjct 676014 TCTCATGCCCGGTCTCACATTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACAC 675955 Query 102323 AGAGTTTGC 102331 ||| ||||| Sbjct 675954 AGACTTTGC 675946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740638643440