Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-17 >seq1 Length=4966325 Score = 107 bits (118), Expect = 2e-17 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || ||||| |||||||| |||||||| |||||||| | ||| Sbjct 2691112 ACAGTTCCTGCCTACTTCAACGACTCGCAACGTCAGGCTACTAAGGATGCTGGTCTCATT 2691171 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || ||||| || || ||||| ||||| || || ||||||||||| |||| || || Sbjct 2691172 GCCGGCCTTAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCTATTGCCTACGGT 2691231 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || | | || || | || || |||||||| || | |||||| Sbjct 2691232 CTTGACAAGAAGACCGAGGGTGAGCGCAACGTCCTCATCTTCGACTTGGGAGGT 2691285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029283995216230