Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=4966325 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| || || || || |||||||||| | ||| | |||| || | ||| Sbjct 2851936 TGGAGGGTAGACTCCTTCTGGATGTTGTAATCGGATAGAGTACGTCCATCCTCAAGCTGC 2851995 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| ||||| || || || ||||||||||| || || || || || Sbjct 2851996 TTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 2852055 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | || || || | ||||| ||||| |||| ||| || ||||| Sbjct 2852056 CTCTTGACGTTGTCGATGGTATCTGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGT 2852114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277303671039