Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 4e-11 >seq1 Length=4966325 Score = 86.0 bits (94), Expect = 4e-11 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| ||||| || || ||| || || | || ||||| | |||||| Sbjct 2851917 ACGAAGGCGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGGATAGAGT 2851976 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||| ||||| || || | || || || ||||||||||| || Sbjct 2851977 ACGTCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCC 2852036 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| || ||||| ||||| || || ||||| | | | | |||| Sbjct 2852037 TTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCTGAAGACTCCA-CCTCAA 2852095 Query 480730 GGGTAATAGTTTTACCGGTGA 480750 |||| || || |||||||||| Sbjct 2852096 GGGTGATCGTCTTACCGGTGA 2852116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268169462868596