Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 293 3e-74 seq12 122 1e-22 seq3 113 6e-20 seq11 111 2e-19 >seq1 Length=4966325 Score = 293 bits (324), Expect = 3e-74 Identities = 561/823 (68%), Gaps = 9/823 (1%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| ||||| || | ||||| || || |||||||| || ||||| || || | ||| Sbjct 2691509 GCTCTCCGTCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACTCTTTCCTCGTCTGCT 2691568 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | |||||||| || ||| || || || ||||||||||| | || ||| Sbjct 2691569 CAGACCTCTATCGAGATTGACTCCCTGTACGAGGGTATCGACTTCTATACCTCGATCACC 2691628 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| |||||| | | || | || | ||||| || || || Sbjct 2691629 CGTGCTCGTTTCGAAGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 2691688 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || |||||||| ||||| || ||||| || | || || ||||| || || Sbjct 2691689 CGCGTCCTCCGTGACGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTCGTTGGT 2691748 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || |||||||| || ||| | || ||||| | || ||||||||| || || Sbjct 2691749 GGTTCCACCCGTATCCCCAAGGTCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 2691808 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| ||||| || ||||| || ||||| ||||| |||||||| Sbjct 2691809 CCCAACAAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCC 2691868 Query 196421 ATTCTCTCAGGTGTTGACAATAATAAC--GTC---CAA-GATCTTCTGCTACTTGATGTT 196474 || || || |||| ||| | | | ||| ||| || | || || || || ||| Sbjct 2691869 ATCCTGTCTGGTG---ACACTTCTTCCAAGTCTACCAACGAGATCCTCCTGCTCGACGTT 2691925 Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534 | || | || || ||| | || || || |||||||| |||||| | || | | Sbjct 2691926 TCGCCGCTCTCTCTCGGTATCGAGACTGCTGGTGGTGTCATGACTGCTCTCATCAAGCGC 2691985 Query 196535 AACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCA 196594 ||||| || || || || |||||| | ||||| || || | ||| || || || Sbjct 2691986 AACACTACCATCCCCACCAAGAAGTCTGAGGTCTTCTCCACCTTCAGCGACAACCAGCCC 2692045 Query 196595 GGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTT 196654 ||||| | || || || || || || || || | || ||||||| ||| | || || Sbjct 2692046 GGTGTCCTCATCCAGGTCTACGAGGGTGAGCGTGCTCGCACAAAGGACAACAACCTGCTC 2692105 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 || | ||||| | || || || ||| |||| ||| | |||||||| ||||| | || Sbjct 2692106 GGCAAGTTCGAGCTTACTGGTATCCCACCTGCGCCCCGTGGTGTTCCTCAGATCGAGGTC 2692165 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 ||||||| | || || || || ||| | |||||| | ||| || |||| |||| Sbjct 2692166 ACCTTCGATGTTGATGCCAACGGTATTATGAACGTCTCCGCTCTCGAGAAGGGCACTGGT 2692225 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 || | | |||||||| ||||| ||||||||||| || ||||| |||||||| || || Sbjct 2692226 AAGACCAACAAGATTGTCATTACGAATGACAAGGGTCGTCTTTCCAAGGAGGAGATCGAG 2692285 Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || ||| || || || || ||||||| || || ||||||| Sbjct 2692286 CGCATGCTTGCTGAGGCCGAGAAGTACAAGGCTGAGGACGAGG 2692328 Score = 284 bits (314), Expect = 2e-71 Identities = 486/703 (69%), Gaps = 8/703 (1%) Strand=Plus/Plus Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345 ||| |||||| || |||||||| ||| | || || || ||||| || || || | | Sbjct 2690685 CATCATGTCT---GCCATTGGTATTGATCTCGGTACAACCTACTCTTGCGTAGGCATCTT 2690741 Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405 |||| || | ||||||||| | || ||||| || ||| | ||||| || || | Sbjct 2690742 CAGGGATGACCGCATTGAGATTATCGCAAACGACCAGGGTAACAGGACAACACCGTCCTT 2690801 Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465 ||||||||| || || | || |||||| |||| || ||||||| || ||| || || Sbjct 2690802 CGTTGCCTTCACCGACACCGAGCGTCTCATTGGCGACTCCGCAAAGAACCAGGTCGCCAT 2690861 Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525 |||||||||||| || ||||| ||||| ||||| || || ||||||||||| || Sbjct 2690862 GAACCCTATCAACACAGTCTTCGACGCCAAGCGCCTCATCGGTCGCAAGTTCAACGACGC 2690921 Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATA 195584 | ||||| | |||||| ||| ||| | | | || || | | ||||| | Sbjct 2690922 CGAGGTCCAGGCCGATATGAAGCACTTCCCCTTCAAGGTCATTGACAAGGGTGGC----A 2690977 Query 195585 AGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTT 195644 ||||| | | | || || || | |||||| |||| || | ||||| || || | Sbjct 2690978 AGCCTGTCGTCCAGGTCGAGTTCAAGGGTGAGGAGAAGACCTTCACACCCGAGGAGATCT 2691037 Query 195645 CGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGA 195704 | || ||| | | | ||||||| ||||||||| || || | | ||||| ||| || | Sbjct 2691038 CTTCCATGATCCTCGTCAAGATGAGGGAGACTGCTGAGTCCTACCTGGGTGGAACCGTCA 2691097 Query 195705 AAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764 | | || || || || || ||||| ||||||| || || ||||| ||||| || |||| Sbjct 2691098 ACAACGCCGTCGTCACAGTTCCTGCCTACTTCAACGACTCGCAACGTCAGGCTACTAAGG 2691157 Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTG 195824 | |||| | ||||| || || ||| || | || ||||| || || || || |||| Sbjct 2691158 ATGCTGGTCTCATTGCCGGCCTTAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTG 2691217 Query 195825 CAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884 | ||||| || ||||| |||||||| | || | || || || | ||||| || Sbjct 2691218 CTATTGCCTACGGTCTTGACAAGAAGACCGAGGGTGAGCGCAACGTCCTCATCTTCGACT 2691277 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 | || |||||||| || ||||| || || | | || |||| ||||| || || || | Sbjct 2691278 TGGGAGGTGGTACATTCGATGTTTCCCTCTTGACCATCGAAGAGGGTATCTTTGAGGTCA 2691337 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | || || ||||||||||| | ||||||||||| ||||| Sbjct 2691338 AGTCCACCGCCGGTGATACTCACTTGGGTGGTGAAGACTTCGA 2691380 Score = 174 bits (192), Expect = 2e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| ||||| ||||| || ||||| ||| |||| | Sbjct 2852114 ACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCAGATACCATCGACAACGTCAAGAGC 2852055 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || || ||||| || | || || ||||| || Sbjct 2852054 AAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 2851995 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||||||||| || | ||||||||| | || ||||||||||| || ||| Sbjct 2851994 CAGCTTGAGGATGGACGTACTCTATCCGATTACAACATCCAGAAGGAGTCTACCCTCCAC 2851935 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| || | ||||| |||||| Sbjct 2851934 CTTGTCCTCCGCCTTCGTGGTGGT 2851911 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || || || || ||||| | |||||||||| Sbjct 2851404 GTGGTATGCAAATCTTCGTCAAGACACTCACCGGCAAGACCATCACATTGGAGGTTGAGT 2851345 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| ||| |||| | ||||| || |||||||| || || ||||| | Sbjct 2851344 CTAGCGACACGATCGACAACGTCAAGTCTAAGATCCAGGATAAGGAGGGTATCCCACCTG 2851285 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || ||||| ||||| ||||| ||||| ||||| || || || || | |||| Sbjct 2851284 ACCAGCAGCGTCTTATCTTTGCGGGTAAGCAGCTGGAAGACGGGCGCACGCTTTCCGATT 2851225 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||||| || || ||||| ||||| | || || ||||| Sbjct 2851224 ACAACATCCAGAAGGAGTCGACACTTCACCTGGTTCTTCGTCTGCGTGGTGG 2851173 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||||||||| || ||||| || || || || || ||| |||| || Sbjct 2851831 ACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCCGATACTATTGACAACGTCAAGTCC 2851772 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||||||||| ||||| |||||||| || || ||||| || | || || || || || Sbjct 2851771 AAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 2851712 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| ||||| ||| |||| |||||| |||| |||||||| || || ||| Sbjct 2851711 CAGCTTGAGGATGGCCGTACACTCTCTGACTACAACATTCAGAAGGAGTCCACACTGCAC 2851652 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || ||||| | || || |||||| Sbjct 2851651 CTCGTTCTGCGTCTGCGCGGTGGT 2851628 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| ||||| || |||||||| || |||||||||| Sbjct 2851632 GTGGTATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACTATCACGCTGGAGGTTGAGT 2851573 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| ||||| ||||| ||| | || | |||||||| || ||||| || || || || | Sbjct 2851572 CGTCGGACACGATCGACAACGTAAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGG 2851513 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || || || ||| | || || || || || || | || | Sbjct 2851512 ACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACACTTTCGGACT 2851453 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || |||||||| || || ||| | || || | ||||| |||||| Sbjct 2851452 ACAACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTTCGTGGTGGT 2851400 >seq12 Length=1018440 Score = 122 bits (134), Expect = 1e-22 Identities = 248/361 (69%), Gaps = 8/361 (2%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGA-ATCTTTCAT 195690 |||||||| || || ||||||| | |||||||||||| || || | || | | Sbjct 445326 CCCGAAGAGATCTCCGCTATGGTTCTTGGCAAGATGAAGGAGGTCGCTGAGAGCTACCTT 445385 Query 195691 GGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACG 195750 || | | || || | || ||||| || || ||||| ||||||| || | || || Sbjct 445386 GGCGAGGAG-GTTAAGAACGCCGTTGTTACCGTTCCTGCCTACTTCAACGACGCTCAGCG 445444 Query 195751 ACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGA 195810 || || |||||||| | |||| || ||||| ||| ||| | || |||| || Sbjct 445445 CGCTGCCACTAAGGACGCCGGAACTATCGCCGGTCTTAACGTTCTCCGTGTTGTCAACGA 445504 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA---ACAAGGACGAAGATAAAAA 195867 || || || || || |||| || ||||| |||||| || || | || | | Sbjct 445505 GCCCACGGCCGCCGCTCTTGCCTACGGTCTTGACAAGTCTGACCAGAAGGA-GCGCCAGG 445563 Query 195868 TGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGG 195927 | | ||| ||| ||||| ||||||||||| || |||||||| | |||| ||||| | Sbjct 445564 T-TCTTG-TCTACGATCTTGGTGGTGGTACTTTCGATGTCTCTATCCTCACCATTGAGGA 445621 Query 195928 TGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | ||||| || || |||| |||||||| ||||| || |||||||| |||||||| Sbjct 445622 CGGCGTTTTCGAGGTCCAGTCTACCGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 445681 Query 195988 T 195988 | Sbjct 445682 T 445682 >seq3 Length=2655511 Score = 113 bits (124), Expect = 6e-20 Identities = 218/312 (70%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 ||||| || |||||| | ||| | || | || ||||| ||||| || || || || Sbjct 1084422 ATCCCCCGCGGTGCTGTCCTCTCTGGACCTCCAGGTACCGGTAAGACACTGCTGGCCAAG 1084363 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665 || | ||| ||||| || | || ||||| |||||||| | |||| |||||| | || Sbjct 1084362 GCCACCGCTGGTGAGTCTGGCGTGCCCTT-CTTCAGTG-TGAGCGGTTCCGAGTT-CGTC 1084306 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 ||||||||||| ||||||||||| ||| || || || || |||| | || || || Sbjct 1084305 GAGATGTTCGTCGGTGTTGGTGCGTCGCGAGTGCGAGACCTGTTTGCCAACGCGCGC-AA 1084247 Query 198726 AATCA-ACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCG-TGGTG 198783 | || ||| |||||||||||||| || ||||| ||||| | ||| ||| | | Sbjct 1084246 GAGCACACCGTGTATCATCTTCATCGACGAGATCGACGCCATCGGTCGCTCGCGTTCGAA 1084187 Query 198784 GAACTACTACACC--TGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGA 198841 | | ||| | ||| || || ||||| || || | |||||| ||||||| || Sbjct 1084186 GCAGAACTTTGGCGGTGGCAACGACGAGCGCGAAGCCACACTCAACCAGATTCTCACAGA 1084127 Query 198842 GATGGATGGTTT 198853 |||||| ||||| Sbjct 1084126 GATGGACGGTTT 1084115 >seq11 Length=1108966 Score = 111 bits (122), Expect = 2e-19 Identities = 220/326 (67%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || | | |||||| || | || || | || || || || Sbjct 496214 AAGATGAAGGAGACCGCCGAGGCCTACATGGGCAAGAACGTCAAGAACGCCGTCGTCACC 496273 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || |||||||| | | ||||| Sbjct 496274 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTCAGATTGCC 496333 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| || || || || || || |||| || ||||| Sbjct 496334 GGTCTCAACGTCCTCCGTGTCGTCAACGAGCCCACCGCTGCCGCCCTTGCCTACGGTCTT 496393 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||| || |||| | || ||| ||||||||||||||||| || Sbjct 496394 GACAAGGCCACCGACGCCG------TCGTCGCCGTCTACGATCTCGGTGGTGGTACATTC 496447 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | ||| | || | ||| | ||||| || ||| | || ||||| Sbjct 496448 GATATCTCCGTCCTCGAGATCCAGAACGGTGTCTTCGAGGTCAAGTCCACCAACGGTGAC 496507 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || |||||||| || ||||| Sbjct 496508 ACTCACCTTGGTGGTGAGGACTTCGA 496533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860533315440