Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 >seq9 Length=1201722 Score = 140 bits (154), Expect = 3e-28 Identities = 242/348 (70%), Gaps = 13/348 (4%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 ||| ||| ||||| ||||| | || | | || | ||||||||| |||||| |||| Sbjct 935491 TGACCTCCGTCTCAGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGGAGATGAAGCCAT 935432 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || || || | ||| || |||||||| |||||||| || | || || | | Sbjct 935431 CGAGGTAATCTTGAAGCTTGTTGGCGTCGTGGGCGCCGTTGATAATCCAGCGGTCATCGT 935372 Query 34433 TGTAATCGACCTGCGTT----TGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGT 34486 || | | || ||| || || || |||||| | ||||||||||| || || | Sbjct 935371 TGG----GGCTTGTGTTGGTCTGAGCTCCAAGCTCGAAACCGAAGTACTTGATGACGTGA 935316 Query 34487 AAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGA 34546 || | ||||| | || | ||||||| || || |||||| ||||| ||||||| Sbjct 935315 GAAGGA--GGACGAGCCAGAGAGTTGGCGACGCTGGTCAAGTTGACAATGACGGTCTTGA 935258 Query 34547 TGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACG 34606 ||||||||||||| ||||||| ||||| || |||| ||| |||||||||||||| | Sbjct 935257 TGCCGTTGCCCTTGCCTTCGATCTTGGACTGGAGGCGCTCCATCTTGTAGCGGTAGAAGG 935198 Query 34607 CGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTG 34654 ||| | |||| |||| || ||| || || |||| || || |||| Sbjct 935197 GGTCGGTGACATCGCGGCGAATGTTAACGGTAGCCATGGTTGC-GGTG 935151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840457847911