Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 >seq1 Length=4966325 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||||||||| | |||||| || || || ||||| || || || |||| Sbjct 2851627 TACCACCGCGCAGACGCAGAACGAGGTGCAGTGTGGACTCCTTCTGAATGTTGTAGTCAG 2851686 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || || || || || || ||||| | | || || ||||| | Sbjct 2851687 AGAGTGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGG 2851746 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| | || || || ||||| ||||| | || | Sbjct 2851747 GAATGCCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCGGATGACTCGA 2851806 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 |||| | || || |||||||| |||| Sbjct 2851807 CTTCGAGGGTGATGGTCTTGCCGGTCA 2851833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824344416953