Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 264 1e-65 seq1 116 4e-21 seq19 102 8e-17 seq2 82.4 7e-11 >seq3 Length=2655511 Score = 264 bits (292), Expect = 1e-65 Identities = 1123/1744 (64%), Gaps = 49/1744 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||| || ||||| || ||||||||||| ||||| | |||| || |||| Sbjct 1395429 GACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGATGATGGTACGCTG- 1395371 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || |||||| | |||||||| || |||||| | || |||||| |||| Sbjct 1395370 --CGAGATTTCCCAGACAGTCTTGTAGAGAACCTTGATCTCGTCAGGAATGTTAGGGATG 1395313 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||||| | || || | | |||| || | || ||| | || || | || Sbjct 1395312 CGCTGGATGGATCCACCCTCGGCAATGATGCGGTTCTTCATGTTCTCGGTCCAGAGACCC 1395253 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| ||||| | || || | | || || ||||| ||||| || |||||||| Sbjct 1395252 ATGTCGACAAGGTCCTTGAGCAACCAAGGGTTGACAACCTGGAACTCTCCAGCGAGCACA 1395193 Query 148290 CGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || || ||| || | ||| || | || || || ||||||||||||| | |||||| Sbjct 1395192 CGACG-AGAGTAAATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTG 1395134 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 || ||| | || || ||||| ||| || ||||| || ||||| | |||| | | Sbjct 1395133 CGAGGTAGAGGCTGTAGGCATAGGCGCAACGAGCAGAGAATTGCGGACACCGTACTGTGC 1395074 Query 148409 TATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468 || || |||||| | |||||||||||||| | ||||| ||| ||||||||| Sbjct 1395073 AATCTTCTCCTTCAGCGAGGCCCAGTCCCAGAGGTCAGTGGGTGTGACGCCCCACATGTC 1395014 Query 148469 GTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 |||||| || || | | || || | ||| ||||||||||| | || || || | Sbjct 1395013 GTACTGAAG-CTGGCCCTGCGAGACAGGGGAGCCCTCGTACGTAGTATAGGGGCCAAACT 1394955 Query 148528 CCGCCGCCAGTTCGC-AGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || ||| |||| || || || ||| ||| ||| || |||||| || || Sbjct 1394954 CCTTAGCCGTCTCGCAAGAAGAGGTCAAG-GCGGCGTGGTAGATAGTCTCGAAGATCTGG 1394896 Query 148587 CTGTTGAGCAGCGCCGCC-GACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||||||| | ||| | || ||| | |||| || || | || ||||| Sbjct 1394895 GTGTTGAGTTTCTTAGCCTCAGGCG-ACTCGAAGGGCAGGCGAAGAGCGAGGAAAGCGTC 1394837 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||| ||||| || || | ||||| |||| ||| | |||| | |||| || Sbjct 1394836 AGCAAGACCCTGGACACCAAGACCAATAGGCCTGTGACGGAAGTTGCTGCGGCGTGCCTC 1394777 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCG------CACC---AC 148756 ||| | || ||||| ||| ||||||||||||| || ||||| ||| || Sbjct 1394776 CTCAACTGGGTAGTGATTGACCTCGATGATCTTGTTGAGGTTGCGTGTGCAGACCTGGAC 1394717 Query 148757 CACCTTTGTAATTCTGCGCAGCAATTCAAAAT---CGTACTTGTCATCTACGATGCATCG 148813 ||| | || | || | || || || | || ||||| ||| |||| | Sbjct 1394716 GACC-TCGTGAAGCT--TCTTGAAATCGAACTCTCCGCGCTTGTAATCGACGA---AAGA 1394663 Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 | | |||| || || || ||||| || || ||||||||| || |||| || | Sbjct 1394662 GGGAAGAGCGACGGAAGCCAGGTTGCAGACAGCGACCTCATCCGGTGCAGTGTATTCGAT 1394603 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 |||||| | ||| || ||| || ||| || | |||||| || |||||||| || Sbjct 1394602 GATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTCCT 1394543 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT 148993 |||| || |||||||| |||||| | || ||||| || ||| | || | || Sbjct 1394542 GTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAAT 1394483 Query 148994 GAACCGATGC--AGGTCCTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTA 149050 | || | || | ||| || || || || | || | ||| || |||||| Sbjct 1394482 G--GCGTACCAGAGCTTCTGAGCACGGACAGTCT-CACGACCCTTACCAAGCTTCTCGTA 1394426 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | || ||||| | |||||||| || |||| |||||||||| | Sbjct 1394425 CTTCTCGTAAAGGGC--AACGAACTCATCGCCGTAAACGTCAGCGAGGCCGGGGCACTCG 1394368 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | ||||||||||| | |||| |||||| | | | || |||| |||||| |||||||| Sbjct 1394367 TTGGGGCACATGAGAGTCCACTCGCCGTTCTCCTGGACACGCTGCATAAAGAGATCGGGA 1394308 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | ||| || ||||| | ||| ||||| || || || ||| ||| | | Sbjct 1394307 ATCCACAGAGCGTAGAAGAGATCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTC 1394248 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 |||| ||| | || ||| | ||| |||||||||||||| | ||| | || | || || Sbjct 1394247 AGGTCGAGGAAGCCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATGGCAAATGCACCA 1394188 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 |||| ||||| ||||||||||| | ||| | ||||||| | || || | ||| Sbjct 1394187 GGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCAGTGTTGTTGTAAACACGGAGCATG 1394128 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACT 149405 || | || | | || ||||| || | || ||| || || | Sbjct 1394127 GGAATCAGACCGTTCGATGTTCCGTTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATG 1394068 Query 149406 TTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGA 149463 ||| ||||||| ||| || ||||| || || ||| ||||| |||||| ||| || Sbjct 1394067 CGGTGGACGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCAACGCGCATGTC-TTGA 1394010 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 | || |||||| ||||| |||||||| ||||||| | || ||||| || ||| Sbjct 1394009 GTGTGTCGTAGATACCCTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGATGACA 1393950 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCT 149583 | || || | | || || || ||| | || || |||||||| || || |||| Sbjct 1393949 TCTGTGGGGACGGTGTACCAGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTCT 1393890 Query 149584 GGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGG 149643 | ||| ||||| | ||||| | || ||||| || |||||||| | | Sbjct 1393889 GCGACATGTAGTCGTATGTCTCGATAGCCTTCTCGATGTCCTCCATGTGGATGCCAACAG 1393830 Query 149644 CGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGT 149703 |||| ||||| ||||| ||||| || ||||| || || ||| || ||||| | Sbjct 1393829 CGACACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCTTGCCGTTGATGCGGAGCAGAT 1393770 Query 149704 AGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAA 149763 | | || | ||||||| | || ||| ||| ||||| ||||||||| ||| | | | Sbjct 1393769 ATGAGCGCTCCAATGTCTTGAATCCGAAGAACTGGTAGTTGAAGTCGCGGTCGTAGACGA 1393710 Query 149764 TGGC 149767 |||| Sbjct 1393709 TGGC 1393706 >seq1 Length=4966325 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| | |||| | ||| || |||||||| ||| Sbjct 2851203 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGCCCGTCTTCCAGCTGCTTACCC 2851262 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || ||||||||||| || ||||| || ||||| || |||||| |||| Sbjct 2851263 GCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGGATCTTAGACTTG 2851322 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | | ||| || || | |||| ||| |||||||| || || Sbjct 2851323 ACGTTGTCGATCGTGTCGCTAGACTCAACCTCCAATGTGATGGTCTTGCCGGTGAGTGTC 2851382 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 2851383 TTGACGAAGATTTGCAT 2851399 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || | | ||| || |||||| | |||||||| Sbjct 2851431 GTCGACTCCTTCTGGATGTTGTAGTC--CGAAAGTGTGCGGCCGTCCTCCAACTGCTTGC 2851488 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| |||||||| || |||||||| ||||| || Sbjct 2851489 CGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTCGACT 2851548 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | |||| || ||||| ||||| | Sbjct 2851549 TTACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATAGTCTTGCCAGTCAGGG 2851608 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 2851609 TCTTGACGAAGATCTGCAT 2851627 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/177 (73%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || | ||| ||| ||||| |||||||||| Sbjct 2851659 GTGGACTCCTTCTGAATGTTGTAGTCAGAGA--GTGTACGGCCATCCTCAAGCTGCTTGC 2851716 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||| || || ||||| |||||||| ||||| || Sbjct 2851717 CGGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGACT 2851776 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | |||| || |||| | ||| || |||| ||||| ||| |||||||||| Sbjct 2851777 TGACGTTGTCAATAGTATCGGATGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCA 2851833 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTG 133520 ||| ||||| ||||| || ||||||||| || | | ||| ||||| ||||||||| Sbjct 2851941 GGTAGACTCCTTCTGGATGTTGTAATCGG--ATAGAGTACGTCCATCCTCAAGCTGCTTG 2851998 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | ||||||||||| ||||| |||||||||||||| |||||| | Sbjct 2851999 CCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTC 2852058 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | || || | | |||||| || | ||||| || || ||||| Sbjct 2852059 TTGACGTTGTCGATGGTATCTGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGT 2852114 >seq19 Length=853957 Score = 102 bits (112), Expect = 8e-17 Identities = 339/520 (65%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || ||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 675654 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTC 675713 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| ||| || || | ||| | | || || Sbjct 675714 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTGGGGTTGCCAAGAGCCAACAGTAG 675773 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 || || || || ||||| ||||||| ||||||| | | | ||||||||||| |||| || Sbjct 675774 GCGATCAGCGACGAACTCGATGTACTGGCACATGAGGCCG-GCGTTCATGCCGAGCAGCG 675832 Query 120530 CCACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 ||| | | | || | | | ||||||| ||| || || ||||| ||| || Sbjct 675833 -CACAAGGGAGGGCGTCAGACAGGAACTCCTGCTCGATTGTGACGGCCTCGGTGATGATA 675891 Query 120589 GCGAGCATAG----TGTGGCCGGGCATCTTGTGTTCGATGC-GCGTTCGGTAGTACAGGC 120643 || | || | || |||| ||| || | || | || |||| Sbjct 675892 GCTGCGACAGCCTCTTTGCTTGGGC------GGTT--ATTCAGCAGAGAGAAGAGAAGGC 675943 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| ||||||| ||||||||| || || || ||||||||| || || || | Sbjct 675944 AAGCAAAGTCTGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTGAGAC 676003 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 ||||||||| || | |||| | |||| |||| || || || ||||| | Sbjct 676004 CGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGAACCACTGAAGAAGA 676063 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 || || ||| ||| || || || | || | ||| || || | ||||| | Sbjct 676064 TACCTTCAACGGCGGCGAAAGCAACGAGACGGTTGGCGAAAGTGGAGTTCTTGTCAGAAA 676123 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||| || |||||| || ||||| || || | ||| || Sbjct 676124 TCCATCGCAGGGCCCAGTCAGCCTTCTTACGGATGCAGGG 676163 >seq2 Length=3786261 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/123 (76%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| | || ||| ||||||||||||||||| Sbjct 2400704 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT--ACGGCCGTCCTCGAGCTGCTTGC 2400647 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || ||||| |||||||| |||||| || Sbjct 2400646 CGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 2400587 Query 133582 TGA 133584 ||| Sbjct 2400586 TGA 2400584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419428293480