Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 >seq1 Length=4966325 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || || ||| || || |||||||| || || Sbjct 2851400 ACCACCACGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 2851459 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||| |||| ||||| || || ||||| || || | ||||||||| || | || Sbjct 2851460 AAGTGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGG 2851519 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| ||| || | | | ||| | ||||| || || | Sbjct 2851520 GATACCCTCCTTGTCCTGAATCTTCGACTTTA-CGTTGTCGATCGTGTCCGACGACTCAA 2851578 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || || || | || || || |||||||||||| Sbjct 2851579 CCTCCAGCGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 2851628 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||| || || || ||| || || |||||||||||||| Sbjct 2851173 CCACCACGCAGACGAAGAACCAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAATCGGAA 2851232 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| || | ||||||||| || | || Sbjct 2851233 AGCGTGCGCCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGACGCTGCTGGTCAGGTGGG 2851292 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || || || | | || | ||| | |||||||| || || || Sbjct 2851293 ATACCCTCCTTATCCTGGATCTT-AGACTTGACGTTGTCGATCGTGTCGCTAGACTCAAC 2851351 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || ||||| |||||| Sbjct 2851352 CTCCAATGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCATA 2851400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703090619840