Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=4966325 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251 |||| || || |||||||| | || ||||| ||| || || |||| || ||| Sbjct 2852116 TCACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCAGATACCATCGACAACGTCAAGA 2852057 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||||| || || || ||||| ||| || ||| || | | |||||||| || | Sbjct 2852056 GCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCA 2851997 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 ||||| | || |||||| | ||| | ||||||||||| ||||||| |||||||| || | Sbjct 2851996 AGCAGCTTGAGGATGGACGTACTCTATCCGATTACAACATCCAGAAGGAGTCTACCCTCC 2851937 Query 206372 ACCTTGT 206378 ||||||| Sbjct 2851936 ACCTTGT 2851930 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| ||||| || || | ||||| |||| Sbjct 2851385 CAAGACACTCACCGGCAAGACCATCACATTGGAGGTTGAGTCTAGCGACACGATCGACAA 2851326 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || || || || || ||| || | |||||||| Sbjct 2851325 CGTCAAGTCTAAGATCCAGGATAAGGAGGGTATCCCACCTGACCAGCAGCGTCTTATCTT 2851266 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| ||||||| || | || | ||||||||||| ||||||| ||||| Sbjct 2851265 TGCGGGTAAGCAGCTGGAAGACGGGCGCACGCTTTCCGATTACAACATCCAGAAGGAGTC 2851206 Query 206364 TACTCTTCACCTTGTT 206379 || |||||||| ||| Sbjct 2851205 GACACTTCACCTGGTT 2851190 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| |||| || || || ||| Sbjct 2851624 CAGATCTTCGTCAAGACCCTGACTGGCAAGACTATCACGCTGGAGGTTGAGTCGTCGGAC 2851565 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| |||||||| || || || || || |||||| || Sbjct 2851564 ACGATCGACAACGTAAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 2851505 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| ||||||||||| || || | || | | || |||||| || Sbjct 2851504 CGTCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACACTTTCGGACTACAACATC 2851445 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 2851444 CAGAAGGAGTCGACGCTCCAC 2851424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817362748067