Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=4966325 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || ||||| ||||| |||||||||||||| | || | Sbjct 2851638 AGACGCAGAACGAGGTGCAGTGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGTGTACGG 2851697 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || ||||| |||||||| || || || ||||| || Sbjct 2851698 CCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCC 2851757 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||||| ||| | || ||||| || || || ||||| || Sbjct 2851758 TTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCGGATGACTCGACTTCGAGGGTG 2851817 Query 134676 ATGGTTTTACCGGT 134689 ||||| || ||||| Sbjct 2851818 ATGGTCTTGCCGGT 2851831 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| ||||| || ||||| || ||||||||||| || ||| | Sbjct 2851410 AGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGG 2851469 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || | ||| ||||| || || || | ||||||||| || || || || || || Sbjct 2851470 CCGTCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCC 2851529 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || ||| | ||||| ||||| || || || || || Sbjct 2851530 TTGTCCTGAATCTTCGACTTTACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTG 2851589 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 2851590 ATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 2851627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396965932040