Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=4966325 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || | ||| || || || || || |||||||| | | || |||| |||| || Sbjct 2851419 ACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC-CGAAAGTGTGCGGCCGTCCTC 2851477 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| || |||||| | ||||||||||| || ||||| || | |||||| || || Sbjct 2851478 CAACTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 2851537 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | | || | ||||| | | ||||| || || || |||| || Sbjct 2851538 AATCTTCGACTTTACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATAGTCTT 2851597 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| ||||| || || || ||||| |||||| Sbjct 2851598 GCCAGTCAGGGTCTTGACGAAGATCTGCATA 2851628 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||| ||| | ||||| ||||||| ||||| ||||| Sbjct 2851203 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGCCCGTCTTCCAGCTGCTTACCC 2851262 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| || || || || | |||||| ||||| |||||| || Sbjct 2851263 GCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGGATCTTAGACTTG 2851322 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||||| || | || || | ||||| || || || Sbjct 2851323 ACGTTGTCGATCGTGTCGCTAGACTCAACCTCCAATGTGATGGTCTTGCCGGTGAGTGTC 2851382 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 2851383 TTGACGAAGATTTGCATA 2851400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933224392424