Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 266 4e-66 seq19 122 1e-22 >seq3 Length=2655511 Score = 266 bits (294), Expect = 4e-66 Identities = 1128/1751 (64%), Gaps = 37/1751 (2%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || | || || || ||| ||||| || | Sbjct 1393804 CCCCCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATCGAGAAGGC 1393863 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | |||||||||||| | ||||| || | ||| |||| ||||| | || || |||| Sbjct 1393864 TATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCGTCGCCGACGCTCT 1393922 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| ||||||||||| || || ||||| |||||||| |||| || ||||| | Sbjct 1393923 TCAACGCTGGTACACCGTCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGGAAG 1393982 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||| | || || | | || ||| ||||| ||| |||| Sbjct 1393983 ACAGCATTGAGGGTATCTACGACACACTCAAGACATGCGCGTTGATCTCCAAGACTGCTG 1394042 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-C 104517 | |||||||| | || |||| | | |||| | ||| ||| |||| ||| | Sbjct 1394043 GCGGTATTGGCCTCAACGTCCACCGCATTCGTGCCACTGG--CTCCTATATCGGAGGAAC 1394100 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || ||| | ||| | ||||| ||||| || || | ||| ||| || ||||| Sbjct 1394101 CAACGGAACATCGAACGGTCTGATTCCCATGCTCCGTGTTTACAACAACACTGCCCGCTA 1394160 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 ||| | || | ||| | | | | || | | || |||| || ||||| |||| Sbjct 1394161 TGTCGACCAGGGTGG-CAACAAGCGCCCTGGTGCATTTGCCATCTACCTCGAGCCGTGGC 1394219 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | | ||||| || || | ||||| || | ||||||| || | Sbjct 1394220 ACGCTGACGTCTTCGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG-T 1394278 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || ||||||||||||| |||||| |||||||| |||||||| ||| || | || ||||| Sbjct 1394279 GCTCGCGATCTCTTCTACGCTCTGTGGATTCCCGATCTCTTTATGCAGCGTGTCCAGGAG 1394338 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| ||||| | || || || || || || ||| | || | || Sbjct 1394339 AACGGCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTTTACGGC 1394398 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || ||||| | ||||||||| ||||||||| | ||| || || ||| || Sbjct 1394399 GATGAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGCTTGGTAAGGGTCGTGAGACTGTC 1394458 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | ||| | || | | ||| | || ||||| || |||| ||||||||||||| || | Sbjct 1394459 CGTGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACCGAGACTGGTAACCCCTT 1394517 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || || ||| ||||| || || ||||| | ||| ||| Sbjct 1394518 CATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCATCCG 1394577 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| ||||| || || ||| | |||| || | |||||| ||||| || Sbjct 1394578 CAGCTCCAACCTCTGCACTGAGATCATCGAATACACTGCACCGGATGAGGTCGCTGTCTG 1394637 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGAT 105109 ||||| || || ||||||| ||| | || ||| | || | | ||| || ||| Sbjct 1394638 CAACCTGGCTTCCGTCGCTCTTCCCTCTTTCGTCGATTACAAGCG-CGGAGA-GTTCGAT 1394695 Query 105110 TATGAAAAACTCCACGAAGT-TACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | | || || ||||| || | | ||| ||| ||||| |||| | || || Sbjct 1394696 TTCAAGAAGCTTCACGAGGTCGTCCAGGTCTG-CACACGCAACCTCAACAAGATCATCGA 1394754 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 ||| ||||| |||||| || || || | | ||| | || ||||| Sbjct 1394755 GGTCAATCACTACCCAGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACAGGCCTATTGG 1394814 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288 ||| ||||| |||||||| || || | ||| | | ||||| | || || || Sbjct 1394815 TCTTGGTGTCCAGGGTCTTGCTGACGCTTTCCTCGCTCTTCGCCTGCCCTTCGAGTCGCC 1394874 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GG 105347 || || ||| || |||| | | || || ||||| || || |||||||| ||||| Sbjct 1394875 TGAGGCTAAGAAACTCAACACCCAGATCTTCGAGACTATCTACCACGCCGC-CTTGACCT 1394933 Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407 | || ||| ||| ||| ||| || ||| || | ||||| || || | | Sbjct 1394934 CTTCTTGCGAGACGGCTAAGGAGTTTGGCCCCTATACTACGTACGAGGGCTCCCCTGTCT 1394993 Query 105408 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTG 105465 | || || |||||| | || ||||||| || | ||| | || | || ||||| Sbjct 1394994 CGCAGGGCCAGCTTCAGTACGACATGTGGG-GCGTCACACCCA-CTGACCTCTGGGACTG 1395051 Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525 || | || ||||| || || | ||| | || || ||| ||| | || || Sbjct 1395052 GGCCTCGCTGAAGGAGAAGATTGCACAGTACGGTGTCCGCAATTCTCTGCTCGTTGCGCC 1395111 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 ||||| |||||||| ||| | || || | || || || || ||||| || |||||||| Sbjct 1395112 TATGCCTACAGCCTCTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACAC 1395171 Query 105586 GACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATC 105644 ||||||| || ||| | | ||||| |||||||| | |||||||| | | Sbjct 1395172 CTCGAACATTTACTCT-CGTCGTGTGCTCGCTGGAGAGTTCCAGGTTGTCAAC---CCT- 1395226 Query 105645 TCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 105700 | || | | ||||| || || ||||||||| || || | |||||| | | ||| Sbjct 1395227 TGGTTGCTCAAGGACCTTGTCGACATGGGTCTCTGGACCGAGAACATGAAGAACCGCATC 1395286 Query 105701 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTG 105760 | | |||||| ||||| || || | ||||| | || || ||| | Sbjct 1395287 ATTGCCGAGGGTGGATCCATCCAGCGCATCCCTAACATTCCTGACGAGATCAAGGTTCTC 1395346 Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820 ||| || || ||||||||| | | |||| | ||||| || || |||||| Sbjct 1395347 TACAAGACTGTCTGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGTGGT 1395406 Query 105821 CGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAG 105880 |||||| ||||| ||| | |||| || |||| | || || ||| |||| Sbjct 1395407 GCCTTCATCGATCAGTCTCAGTCTCTGAACATCCACATGAAGGAGCCTACTATGGGCAAG 1395466 Query 105881 CTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTC 105940 || | || |||||| | | |||||| || ||||| || || ||||| |||||| Sbjct 1395467 ATCACATCCATGCACTTCGCTGGATGGAAGCTTGGCCTCAAGACCGGAATGTACTACCTC 1395526 Query 105941 CGATCTAAGGC 105951 ||| | | ||| Sbjct 1395527 CGAACCATGGC 1395537 >seq19 Length=853957 Score = 122 bits (134), Expect = 1e-22 Identities = 106/129 (82%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 ||||| |||||||||||| |||||| ||| ||| | || | ||||| |||||||| || Sbjct 676073 GTTGAAGGTATCTTCTTCAGTGGTTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGTGG 676015 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946 ||||||||| |||||| |||||||||||||| ||||||||||||||||| | ||| Sbjct 676014 TCTCATGCCCGGTCTCACATTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACAC 675955 Query 94947 AGAGTTTGC 94955 ||| ||||| Sbjct 675954 AGACTTTGC 675946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259144997480