Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 >seq11 Length=1108966 Score = 96.9 bits (106), Expect = 3e-15 Identities = 184/271 (68%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 ||||||||||| | |||| || || | | || |||| ||||| | || Sbjct 372722 AAGATCTGGGATGGCAACGGTTCGCGCGCATACCTCGACAGTGTAGGGTTGTCGCATCAT 372781 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 |||||||| || ||||||| |||||||| ||||| ||| |||||||||| || || || Sbjct 372782 GAGGAGGGAGATCTGGGCCCTGTCTACGGATTCCAATGGCGACACTTTGGTGCTGAATAC 372841 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGAC 34507 |||| || || |||||| ||||||| || | || ||| || | || || || Sbjct 372842 AAGGGGCATGATGCAGACTATACGGGACAAGGTGTAGATCAGTTGGCTGAAGTCATTGAT 372901 Query 34508 ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGAT 34567 | |||||| ||| | ||| | |||||| | | | |||||||| ||| ||| Sbjct 372902 AAGTTGAAGAACCGCCCATACGACCGGAGGATCATATTAAGTGCGTGGAATCCGGCAGAT 372961 Query 34568 CTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 ||| |||||| ||||| || ||||||| Sbjct 372962 CTCAAAAAGATGGCTCTCCCACCCTGCCACA 372992 Score = 96.9 bits (106), Expect = 3e-15 Identities = 184/271 (68%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 ||||||| || ||||| |||||| |||||| ||| |||||||| | | | || Sbjct 372992 TGTGGCAGGGTGGGAGAGCCATCTTTTTGAGATCTGCCGGATTCCACGCACTTAATATGA 372933 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866 |||| | ||| | ||| |||||| | || || || | || ||| || | | Sbjct 372932 TCCTCCGGTCGTATGGGCGGTTCTTCAACTTATCAATGACTTCAGCCAACTGATCTACAC 372873 Query 6867 CCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGA 6926 | ||||||| |||||| || || |||| || || || |||||||||| ||| |||| Sbjct 372872 CTTGTCCCGTATAGTCTGCATCATGCCCCTTGTATTCAGCACCAAAGTGTCGCCATTGGA 372813 Query 6927 ACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAA 6986 | |||||||| ||||||| || |||||||| || | ||||| |||| || Sbjct 372812 ATCCGTAGACAGGGCCCAGATCTCCCTCCTCATGATGCGACAACCCTACACTGTCGAGGT 372753 Query 6987 AGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | || || |||| | ||||||||||| Sbjct 372752 ATGCGCGCGAACCGTTGCCATCCCAGATCTT 372722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261128055440