Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=4966325 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || || || ||||| | || ||||| || | Sbjct 2851399 ATGCAAATCTTCGTCAAGACACTCACCGGCAAGACCATCACATTGGAGGTTGAGTCTAGC 2851340 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || || || ||| | || || || || Sbjct 2851339 GACACGATCGACAACGTCAAGTCTAAGATCCAGGATAAGGAGGGTATCCCACCTGACCAG 2851280 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || || || |||||||||| ||||| | |||||||||| Sbjct 2851279 CAGCGTCTTATCTTTGCGGGTAAGCAGCTGGAAGACGGGCGCACGCTTTCCGATTACAAC 2851220 Query 23791 ATACAAAAAGAGTCCACA 23808 || || || ||||| ||| Sbjct 2851219 ATCCAGAAGGAGTCGACA 2851202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008664875316