Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 >seq1 Length=4966325 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || |||||| |||||||||||||||| || |||| |||| ||| Sbjct 2851191 ACCAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGCCCGTCTTCC 2851250 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | ||||||||| || | || | ||| ||||| ||| Sbjct 2851251 AGCTGCTTACCCGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGG 2851310 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || |||||| || || ||||||| || || ||||| Sbjct 2851311 ATCTTAGACTTGACGTTGTCGATCGTGTCGCTAGACTCAACCTCCAATGTGATGGTCTTG 2851370 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| Sbjct 2851371 CCGGTGAGTGTCTTGACGAAGATTTGCAT 2851399 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 2851418 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGGCCGTCCTC 2851477 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| ||||| ||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 2851478 CAACTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 2851537 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | || ||||| | || || ||||||| ||| || ||||| Sbjct 2851538 AATCTTCGACTTTACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATAGTCTT 2851597 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| |||||||| ||||| Sbjct 2851598 GCCAGTCAGGGTCTTGACGAAGATCTGCAT 2851627 Score = 98.7 bits (108), Expect = 7e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| |||||||||||||||| || || | || || Sbjct 2851930 ACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGGATAGAGTACGTCCATCCTCA 2851989 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| || | ||| | |||||||| ||| Sbjct 2851990 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 2852049 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | || |||||||| | || |||||||| Sbjct 2852050 ATCTTGCTCTTGACGTTGTCGATGGTATCTGAAGACTCCACCTCAAGGGTGATCGTCTTA 2852109 Query 44309 CCCGTGA 44315 || |||| Sbjct 2852110 CCGGTGA 2852116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989404064059