Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq332 152 6e-32
>seq332
Length=679357
Score = 152 bits (168), Expect = 6e-32
Identities = 392/582 (67%), Gaps = 14/582 (2%)
Strand=Plus/Plus
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
||||| || || | |||||||| | | |||||| |||| || | ||| || | |||
Sbjct 209653 CCAGGGCACTCGTTGGGACACATAAGGGTCCACTCGCCGTTCTCTTGCACACGCTGCATG 209712
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCC 54099
|||||||| |||||||| | ||| ||| || ||||| | | | | ||||| || ||
Sbjct 209713 AAGAGATCGGGAATCCACAAAGC-ATAGAAGAGATCGCGAGCACGAACCTCCTCCTTGCC 209771
Query 54100 TGTATTCTTTTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATA 54158
||||| | || |||||||| |||| | | |||| |||||||| || | ||| |
Sbjct 209772 GTGGTTCTTCCTCAGGTCGAGGAA-GCCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGA 209830
Query 54159 TGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 54218
||| | | | ||||| || ||||| || ||||| || | || | |||||||| || |
Sbjct 209831 TGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCGACATAACGGGCGGTGTTGTTGT 209890
Query 54219 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 54278
| || | | ||| ||||| | ||| || |||| || ||||| || || || |
Sbjct 209891 AGACACGGAGCATAGGAATCAAACCGTTTGATGTTCCGTTGGTTCCTCCAATGTACGAGC 209950
Query 54279 CACTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAA 54336
| |||||||||| | |||| | || || || || || | || ||||| ||
Sbjct 209951 CGGTGGCACGAATGCGGTGGACGTTGA--GGCCAATACCGCCAGCAGTCTTGGAGATCAA 210008
Query 54337 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 54396
||||| || | ||| || ||||| ||||| || || || ||| |||||| | ||
Sbjct 210009 CGCGCAGGTCTTCAGCGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAG 210068
Query 54397 AAAACAGCTAGACATTTGGTGACGACTA-GTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455
|| ||| ||||| || || || || || ||||| || | || || || ||||
Sbjct 210069 GAAGCAGGATGACATCTG-TGGGGATGGTGTGCCGGCATTGAAGAGTGTCGGCGACGCGT 210127
Query 54456 GCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CA 54513
| || || | || | || | |||| | ||| |||||||| || || || ||| |
Sbjct 210128 GTGTGAAGTACTTCTGCGACATGTAG-TCGTATGTCTCGATGGCCTTCTCAATGTCCTCC 210186
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 54555
|| || || || || ||||||||||| | ||||||||| ||
Sbjct 210187 ATG-TGGATGCCAACAGCGACACGCATGAGCATGTGCTGCGG 210227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718698185680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |