Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq311 91.5 2e-13 >seq311 Length=328692 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 |||||||||||| || ||||| ||| |||| | | || |||| | || || || Sbjct 189781 GAGCTGGTCCACACCTTGCCCTGTGTAGTCTGCATCGTGACCCTTGTACTCCGCACCAAA 189722 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||||| ||| || ||||||||||| |||||||| || || ||| |||| | ||| Sbjct 189721 GTGCCGCCATTGAAACCCGTAGACAGGCCCCAGATCTCCCTCCTCGTGGTGCGATAACCC 189662 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCG 146172 | | ||||| | | || || |||||| ||||||||||||||| || | || | Sbjct 189661 TACACTATCGAGGTATGCGCGCGAACCGTTGCCGTCCCAGATCTTGATACCGGCTTCTTG 189602 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCA 146215 ||| | ||| ||| || ||||| || ||||||||||| Sbjct 189601 GAGGG--ACTTGTAGTGAGTTGACCCGGCGACGAACCAGAGCA 189561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073915999640