Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq332 95.1 2e-14 >seq332 Length=679357 Score = 95.1 bits (104), Expect = 2e-14 Identities = 180/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||| | || ||||||||||||||||| | || ||| || || || || Sbjct 209973 GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCAACGCGCAGGTCTTCAGCGTGTCGTA 210032 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 |||||||||||||| || || | | | | | |||||||| || || | || || | Sbjct 210033 GATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGTGGGGA 210092 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 ||| || ||| || ||||| || || || || || || || | | ||||||| Sbjct 210093 TGGTGTGCCGGCATTGAAGAGTGTCGGCGACGCGTGTGTGAAGTACTTCTGCGACATGTA 210152 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCC--GTGAATGCCGACAGCCACACGC 95016 || ||||| || ||| | | ||||| ||| ||| ||||| ||||| |||||| Sbjct 210153 GTCGTATGTCTCGATGGCCTTCTCAATGTC--CTCCATGTGGATGCCAACAGCGACACGC 210210 Query 95017 ATAATCATGTCCTGAGGGCGCTC 95039 || | ||||| ||| |||||||| Sbjct 210211 ATGAGCATGTGCTGCGGGCGCTC 210233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579042493405