Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq229 107 2e-18 >seq229 Length=126262 Score = 107 bits (118), Expect = 2e-18 Identities = 123/164 (75%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 5591 ATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAAC 5650 || ||||| || || |||||||| ||| ||||| || ||| ||| | | |||| | Sbjct 30164 ATAAGCTGGGCAATACGGTCGCCGACCTTGACCTCAAAGTCGGTGTCGGACAGGTTGGCC 30223 Query 5651 AGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACG---TCG 5707 || | ||||||||| ||| | |||||||||||| ||||| |||| ||| | ||| Sbjct 30224 AGGATGACGCCCACGGGGCCTCTGTAGTCGGCGTCGATCACACCCG---CCATGGTATCG 30280 Query 5708 ATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||| ||||||| | || |||||||||||||||||||| || || Sbjct 30281 ATGCCGTGCTTGGCTGCGAGGCCGGAGCGGGGAGCCACTCGTCC 30324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052350656392