Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq289 122 2e-22 >seq289 Length=227737 Score = 122 bits (134), Expect = 2e-22 Identities = 248/367 (68%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | |||||||| ||||||||||||||||||||| ||| Sbjct 105179 TCGAAGAAGTTGGTCTTGCCAGCAAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 105238 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| |||||||| | ||| || || | | | |||||| || || ||||| | Sbjct 105239 GCGTTGTAGTGCTTGGGGTTGCCGAGGGCCAGCAGCAGGCGGTCGGCGACGAACTCAATG 105298 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || | | ||||||||| | || |||||| | || || | | | Sbjct 105299 TACTGGCACATGAGACCGGCGTTCATGCCGAGCAGGGCACAAGGCAGGGCATCGGACAAG 105358 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGC-----CTTCACCTGTGCCAGAG 251797 || |||| ||| | | ||| ||||| | || || | | | ||| | | Sbjct 105359 AACTCCTGCTCGATTGTAACGGCCTCGGTGATGATGGCTGCGACGGCCTCCTTGCTTGGG 105418 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 | ||||| |||| ||| | || || |||| | ||||| ||||||| Sbjct 105419 --CGGTTGTT---CAGCAAAGAGAAGAGAAGGCAAGCAAAGTCGGTGTGCATGCCCTCGT 105473 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 ||||| ||||| ||||||||| | || || ||||| | ||||| ||| | |||| Sbjct 105474 CGCGAGAGATGAGCTCGTTGGAGAATGTGAGACCGGGCATAAGACCACGCTTCTTCAGCC 105533 Query 251918 AGAAGAT 251924 ||||||| Sbjct 105534 AGAAGAT 105540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831650858831