Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq308 96.9 3e-15 >seq308 Length=314950 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | ||| | || || || || ||||||||||| ||| Sbjct 275838 ATACCACCACGCAGACGCAGGACAAGATGCAGTGTGGACTCCTTCTGAATGTTGTAGTCG 275897 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| || ||||||||| |||| |||||||| ||||| || Sbjct 275898 GAGAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGG 275957 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | |||||||| || ||| Sbjct 275958 GGAATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTGTCGGACGACTCG 276017 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | || | || || ||||||| Sbjct 276018 ACCTCGAGAGTGATGGTCTTTCCGGTCA 276045 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| || || | || || || || || |||||||| ||| Sbjct 275610 ATACCACCGCGGAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 275669 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| || || || || ||||||||| ||||||||||||| ||||||||| Sbjct 275670 GAAAGTGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGA 275729 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || |||||| || | | || | ||||| | || || Sbjct 275730 GGGATGCCCTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCCGACGACTCA 275789 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| |||| || || || || |||||||| Sbjct 275790 ACCTCAAGTGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 275839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132397928292