Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq332 242 7e-59 seq289 242 7e-59 >seq332 Length=679357 Score = 242 bits (268), Expect = 7e-59 Identities = 1131/1768 (64%), Gaps = 73/1768 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| |||||||| | ||||| || || |||| ||| | || || Sbjct 208809 GTTGACGACCTGGAACTCTCCAGCAAGCACACGACGGGAATAGATGTTCGAGGTGTAAGG 208868 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||| || || ||||| | || ||||| |||||||||| | Sbjct 208869 CTCGAAGCACTCGTTGTTACCAAGAATCTGGGAGGTAGAGGCAGTGGGCATGGGCGCAAT 208928 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 |||||| ||| | || |||||| ||| ||| | || || | || |||| Sbjct 208929 GAGCAGAGAGTTGCGGACACCGTGC---TGG--GCGATCT-TGTCCTTCAGCGAGGCCCA 208982 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | || |||| || | | ||| |||||||||||| |||||||| | |||| Sbjct 208983 ---GTCCCAGAGATCAGTGGGGGTGACGCCCCACATGTCGTACTGCAGCTGGCCCTGCGA 209039 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCT 244388 || || ||| ||||| || | ||| ||||| || ||| || || | Sbjct 209040 AACAGGCGAGCCTTCGTACGTAGCGTAAGGACCAAGCTCCTTGGCAGTCTCGCAAGAAGA 209099 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT-G 244447 ||| || || |||| || ||||||||||||||| | |||| | | ||| | Sbjct 209100 GGTC-AGAGCAGCGTGATAAATGGTCTCGAAGATC------TGGATGTTGAGCTTCTTAG 209152 Query 244448 CCGCAGGTGAAGGGGATGCCCATC----ATC-ATGAAGACGTCGGCCAGTCCCTGCACGC 244502 || ||||||| | | | | | | | | | ||| |||| || || || || || | Sbjct 209153 CCTCAGGTGACTCGAAAGGCAAGCGAAGAGCGAGGAAAGCGTCAGCAAGACCTTGGACAC 209212 Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562 | | || || || ||||| || |||| ||| || || ||||| || || Sbjct 209213 CAAGACCAATAGGCCTGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACGGGATAGTGGT 209272 Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT 244622 | | ||||| | |||||| || ||||| ||| | | ||||| ||| ||| || Sbjct 209273 TAACCTCGATGATCTTGTTAAGATTGCGAGTGCAGACCTGCACGACCTCGTGAAGCTTCT 209332 Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682 || ||| |||| || || | || || || || | || || | Sbjct 209333 TGAAATCGAACTC----------TCCACGCTTGTAGTCG--ACGAAGGAGGGCAGAGCAA 209380 Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742 || ||| ||||||||||| || ||||| || | |||||||| || ||||| |||| Sbjct 209381 CGGAGGCAAGGTTGCAGACAGCAACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGC 209440 Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802 | | || || ||||| || |||| || || ||| ||| |||| || | Sbjct 209441 ACAAATTCGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCAGCAT 209500 Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862 ||||||||||||||||||| || ||||| ||| || | || | | || ||||| Sbjct 209501 CCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGA 209560 Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | | | ||| ||| ||| |||| | ||||| |||||| ||| |||| Sbjct 209561 GCTTCTGAGCACGGACAGTCTCGCGACCACGACCCTCCTTCTCGTACTTCTCGTAAAGGG 209620 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGA 244981 | |||||||| ||| |||| || | ||||| |||||| || ||| ||||| || Sbjct 209621 CAACGAACTCGTCGCCGTAGACGTCAGCGAGGCCAGGGCAC-TCGTTGGGACACATAAGG 209679 Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041 ||||||||||| || | || | |||||||||||| ||||| ||||| | || | | Sbjct 209680 GTCCACTCGCCGTTCTCTTGCACACGCTGCATGAAGAGATCGGGAATCCACAAAGCATAG 209739 Query 245042 AAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 ||||| || | | | ||| ||| ||| |||||||||||| || | ||| || Sbjct 209740 AAGAGATCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCGAGGAAGCCA 209799 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 |||||||| ||||||| ||||| | ||||| || | || || || ||||||||||| Sbjct 209800 AAGACGTCAGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCA 209859 Query 245162 CCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 |||||||| | | | || ||| |||| ||| || || |||| | | || Sbjct 209860 CCCTGGTCGA----CATAACGGGCGGTGTTGTTGTAGACACGGAGCATAGGAATCAAACC 209915 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---TGAGGTTGCTGAT 245274 ||| || |||||||| || ||||| | ||| || | | || ||| | | | Sbjct 209916 GTTTGATGTTCCGTTGGTTCCTCCAATGTACGAGCCGGTGGCACGAATGCGGTGGACGTT 209975 Query 245275 GGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGC 245334 | | ||| | ||||| || ||||||||| | |||||| |||| | ||||| Sbjct 209976 G---AGGCCAATACCGCCAGCAGTCTTGGAGATCAACGCGCAGGTCTTCAGCGTGTCGTA 210032 Query 245335 TATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCT 245393 || ||||| ||||||||| |||||||| || || |||||||| |||| ||| ||| Sbjct 210033 GATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGTGGGGA 210092 Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGG 245452 ||| | ||| | ||||| || || || ||||| || ||||| | || ||| | | Sbjct 210093 TGGTG-TGCCGGCATTGAAGAGTGTCGGCGACGCGTGTGTGAAGTA-CTTCTGCGACATG 210150 Query 245453 AACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTC 245512 | |||| |||| || || |||| || |||||| | ||| | | Sbjct 210151 TAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATGCCAACAGCGACACGC 210210 Query 245513 ATGAGGGTGTGCTG-GGGCGTCTCGATGGGTCCCTCGGGTCCCTT------GAGCATGTA 245565 ||||| ||||||| ||||| ||| || ||| | || || ||||| || Sbjct 210211 ATGAGCATGTGCTGCGGGCG-CTC---GGCAACCTTG---CCATTGATGCGGAGCAGATA 210263 Query 245566 GGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGAC 245625 |||||||| || |||||||| || ||| || |||| ||||| || || || Sbjct 210264 TGAGCGCTCCAGGGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCACGGTCGTAGACGAT 210323 Query 245626 GGCTGCGTCGAGTCTC-TCGGCGTGCTTCTGACTGACCTCGTAAAACTTTTGCGCTATGA 245684 ||| || || ||| ||||| || | ||| ||| || ||| | | | || | Sbjct 210324 GGCACTGTTAAG-CTCATCGGCATGATCCTGGATGATCTTGTAGACTCGGTCTGAAATCA 210382 Query 245685 GGGGAGCCCTGAGCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCAC-ACCTCC 245743 ||| || || | | || ||||||| | | |||| || || || || | Sbjct 210383 TGGGCTGGCTCTTGCCATTCTTAGGGTTGACGTAGGAGTAGAG-GTCGTGGACGACAGCA 210441 Query 245744 GAGAACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTG 245803 ||||||| | || |||| || ||||||| ||| || || ||||| || | || Sbjct 210442 GAGAACTGCTTCTTTGTCTGCTTGTGGAGGTTGGAGACGGCGATACGCGCGGCGAGGATG 210501 Query 245804 CTGTAGTCGGGGTGAGTGGTGGTCATGT 245831 |||||||||||| ||||||||||||| Sbjct 210502 GCGTAGTCGGGGTGTGTGGTGGTCATGT 210529 >seq289 Length=227737 Score = 242 bits (268), Expect = 7e-59 Identities = 601/912 (66%), Gaps = 84/912 (9%) Strand=Plus/Minus Query 42301 TCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGG 42360 ||||| |||||||||||||| || || ||||||||| |||||||| || || Sbjct 106051 TCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCAGAGGAGATCGATCTCT 105992 Query 42361 CCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | |||| | || |||| || ||| || Sbjct 105991 CCAAGGACCTTCACGACTGGAACAAGC-GTCTCAACGATGACGAGCGTTTCTTCATCTCC 105933 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || || |||||||| ||||| |||||||| ||||| |||||||| | | | Sbjct 105932 CACGTCCTCGCTTTCTTCGCTGCCTCCGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 105873 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 ||| ||||| ||| | ||||| || |||||||||||||||||||| || Sbjct 105872 TTCTCTGGCGAGGTACAGATCCCCGAGGCACGATGCTTCTACGGCTTCCAGATTATGATG 105813 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||||| ||| | ||| ||| | || || |||| |||||| || ||| Sbjct 105812 GAGAACGTCCACGCCGAGACATACTCTCTCCTCATCGACACCTACATCAGCGAGCCCAAG 105753 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGA----------------------------- 42627 |||| | |||||||| ||||| || | Sbjct 105752 CAGCGCACATACCTGTTCAACGCCATTGACAACAGTAAGTTGCTACGCATCACGTACTCC 105693 Query 42628 -----CGATGC----------------CCTGCATCAAGAAGAAGGCGGACTGGGCGCTCA 42666 | |||| |||||||| |||||||| || ||||| || Sbjct 105692 TCGACCTATGCTAACTCACCCTAGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCCCTGC 105633 Query 42667 ACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 |||||| | | | || | | || |||| | | | || || || || | || || Sbjct 105632 GATGGATCTCG-GACAAGAACTCTACCTTCGCCAACCGCCTTGTCGCTTTCGCTGCTGTT 105574 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTC 42784 || |||||||||||| || | ||||| |||||||||||||| ||| || ||| | Sbjct 105573 GAAGGCATCTTCTTCAGCGGTTCGTTCGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCT- 105515 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 |||||||| ||||| ||||| ||||| |||||| | |||||||| |||| | || Sbjct 105514 TATGCCCGGTCTCACATTCTCCAACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGA 105455 Query 42845 CTTTGCCTGCCTCCTGTTCTC------GAGCCACCTCAGGCACAAGCCCTCGAAGGAGCG 42898 |||||| ||||| || ||||| || | ||| || ||||| |||||| Sbjct 105454 CTTTGCTTGCCTTCTCTTCTCTTTGCTGAACAACC----GCCCAAGC-----AAGGAGGC 105404 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT 42958 ||| ||||||||||| |||||||| |||||| |||||||| | | | | || Sbjct 105403 CGTCGCAGCCATCATCACCGAGGCCGTTACAATCGAGCAGGAGTTCTTGTCCGATGCCCT 105344 Query 42959 GCC-CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 ||| ||| ||||| ||||||||||| || ||||||||| ||||||| ||| ||||| Sbjct 105343 GCCTTGTG-CCCTGCTCGGCATGAACGCCGGTCTCATGTGCCAGTACATTGAGTTCGTCG 105285 Query 43018 CCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGC---CTCTACAACACGCCGTGCCCC 43073 |||||| || ||| || | || || || | | ||||||| | | |||| Sbjct 105284 CCGACCGCCTGCTGCTGGCCCTCGG----CAACCCCAAGCACTACAACGCCACCAACCCC 105229 Query 43074 TTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 43133 |||||||| |||||||||||||| | | |||||||||||||| |||||||||||||| Sbjct 105228 TTCGACTTCATGGAGAACATCTCTCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTT 105169 Query 43134 GCCGACTACCAG 43145 | ||||||||| Sbjct 105168 GGTGACTACCAG 105157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334584542160