Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq332 192 7e-44 >seq332 Length=679357 Score = 192 bits (212), Expect = 7e-44 Identities = 1116/1772 (63%), Gaps = 49/1772 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| ||| | ||| | | ||||||||||||||| || |||||||| | Sbjct 208472 TGAACTGAATAGGTGCAGAGGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGGC 208531 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | ||||||| || | ||||| || | | |||| | || || | |||| Sbjct 208532 CAAGCTTCCATCCAGCAAAGTGCATGGATGTGATCTTGCCCATGGTAGGCTCCTTCATGT 208591 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 | ||||| | || || || || |||||| ||||| || || ||||| | || | Sbjct 208592 GAATGTTCAGAGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGGATGA 208651 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 | | ||| ||||| || || ||||||| ||| || ||||| || || | Sbjct 208652 TGGTACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGAACCTTGATCTCATCAGGAATGT 208711 Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 113864 ||| |||||||| |||||| | | ||| | | |||||| | || || || Sbjct 208712 TAGGGATGCGCTGGATGGATCCACCCTCGGCAATGATGCGGTTCTTCATGTTCTCTGTCC 208771 Query 113865 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCAC 113921 ||||||| || | ||||||| ||| | | ||||| || ||||| | Sbjct 208772 AGAGACCCATGTCGACAAGATCCTT---GAGCAACCAAGGGTTGACGACCTGGAACTCTC 208828 Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981 | || || || | |||||| || | ||||| ||||| |||||||| ||||||| Sbjct 208829 CAGCAAGCACACGACGGGAATAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGTTAC 208888 Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041 | | || |||| ||| ||||| ||||||||||| || ||||| || ||| |||| || Sbjct 208889 CAAGAATCTGGGAGGTAGAGGCAGTGGGCATGGGCGCAATGAGCAGAGAGTTGCGGACAC 208948 Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCC 114097 | | | || ||||| || | | ||||||| || || | || | | Sbjct 208949 CGTGCTGGGCGATCTTGTCCTTCAGCGAGGCCCAGTCCCAGA-GATCAGTGGGGGTGACG 209007 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 ||| ||||| || |||| || || || || | ||||| || || | || || Sbjct 209008 CCC---CACATGTCGTACTGCAGCTGGCCCTGCGAAACAGGCGAGCCTTCGTACGTAGCG 209064 Query 114158 TATGGGCCCTCAACCTCCGCCAATTCGGAG-CTCGCCTC--GAGG-----GCTGCGTGAT 114209 || || || || |||| || | || ||||| |||| || ||||||| Sbjct 209065 TAAGGACC---AAGCTCC-----TTGGCAGTCTCGCAAGAAGAGGTCAGAGCAGCGTGAT 209116 Query 114210 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGCGAGT 114268 | || ||||| || || | || | ||| ||||| || || ||| || || Sbjct 209117 AAATGGTCTCGAAGATCTGGATGTTGAGCTTCTTAGCCTCAGGTGACTCGAAAGGCAAGC 209176 Query 114269 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328 | | ||| | || || |||||||||||||| || ||||| || | || | Sbjct 209177 GAAGAGCGAGGAAAG-CGTCAGCAAGACCTTGGACACCAAGACCAATAGGCCTGTGACGG 209235 Query 114329 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 | || || || ||| |||||||| || ||||| | | | || ||| Sbjct 209236 AAGTTGCTGCGGCGTGCCTCCTCAACGGGATAGTGGTTAACCTCGATGATCTTGTTAAGA 209295 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 || ||| |||| || || |||||||| | | |||| || | | || Sbjct 209296 TTGCGAGTGCAGACCTGCACGACCTCGTGAAGCTTCTTGAAATCGAACTCTCCACGCTTG 209355 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | | ||| | || || || | || || || || || |||| |||||| Sbjct 209356 TAGTCGACGAAGGAGGGCAGAGCAACGGAGGCAAGGTTGCAGACAGCAACCTCATCAGGC 209415 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 | |||||||| || || || || |||||||| || || |||||| || | |||||| Sbjct 209416 GCGGTGTACTCGATGATCTCAGTGCACAAATTCGAGCTGCGAATGGTACCGAGGTTCTTC 209475 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || ||| |||| ||||||||||| |||||| | || | || ||||| || Sbjct 209476 TGGTTGCTCTTCCTGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 209535 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687 || | || ||||| || | ||||| | || | || | ||||| || | || || Sbjct 209536 TGAGCCTCAAGAATGGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACC 209594 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||||| ||||||||| ||| ||||| | ||||| || || | | || | ||| || Sbjct 209595 CTCCTTCTCGTACTTCTCGTAAAGGGCAACGAACTCGTCGCCGTAGACGTCAGCGAGGCC 209654 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | || || | || | ||| | || ||| | ||||||| |||||| Sbjct 209655 AGGGCACTCGTTGGGACACATAAGGGTCCACTCGCCGTTCTCTTGCACACGCTGCATGAA 209714 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 ||| || || ||||| | ||| |||||||||| ||| ||| | || || | || || Sbjct 209715 GAGATCGGGAATCCACAAAGCATAGAAGAGATCGCGAGCACGAACCTCCTCCTTGCCGTG 209774 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 || | || || | ||| | | || || ||||||||||| || ||||| | || Sbjct 209775 GTTCTTCCTCAGGTCGAGGAAGCCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATGGC 209834 Query 114928 GATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 | | || | | || ||| |||||| ||||| | || ||| || | Sbjct 209835 AAAAGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACATAACGGGCGGTGTTGTTGTA 209891 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGAC 115039 || || ||||| ||||| | ||| | ||| || || || || | || |||||| | Sbjct 209892 GACACGGAGCATAGGAATCAAACCGTTTGATGTTCCGTTGGTTCCTCCAATGTACGAGCC 209951 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 |||| | | |||| || | |||||||| || || ||| ||||| | Sbjct 209952 --GGTGGCACGAATGCGGTGGACGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCAAC 210009 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 ||||| | | || || ||||||| || || || ||| |||| | |||| ||| Sbjct 210010 GCGCAGGTCTTCAGCGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGG 210069 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 |||||| ||||| ||||| |||||| || || |||||||| || || | |||||| Sbjct 210070 AAGCAGGATGACATCTGTGGGGATGGTGTGCCGGCATTGAAGAGTGTCGGCGACGCGTGT 210129 Query 115220 ATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| ||| | || ||||| | ||||| ||||| | | | |||||| ||| Sbjct 210130 GTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCAT 210188 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGT 115310 ||| || || | | ||| ||||| | ||||| Sbjct 210189 GTGGATGCCAACAGCGACACGCATGAGCATGT 210220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350680434280