Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq332 185 1e-41 seq289 105 8e-18 >seq332 Length=679357 Score = 185 bits (204), Expect = 1e-41 Identities = 1101/1746 (63%), Gaps = 27/1746 (2%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| | || ||||| ||| || ||||| | Sbjct 210228 CCCGCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATTGAGAAGGC 210169 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | |||||||||||| | ||||| | | ||| |||| ||||| | || || |||| Sbjct 210168 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCGTCGCCGACACTCT 210110 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 |||| || || |||||| || || ||||| || ||||| || | | ||||||| Sbjct 210109 TCAATGCCGGCACACCATCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 210050 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || | || || |||| ||| || | || || ||||| ||| |||| Sbjct 210049 ACAGCATTGAGGGTATCTACGACACGCTGAAGACCTGCGCGTTGATCTCCAAGACTGCTG 209990 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 | ||||| || | || |||| | | |||| | | |||||| || |||| || Sbjct 209989 GCGGTATTGGCCTCAACGTCCACCGCATTCGTGCCACC--GGCTCGTACATTGGAGGAAC 209932 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || |||| | ||| | ||||| ||||| || || | ||| ||| || || || Sbjct 209931 CAACGGAACATCAAACGGTTTGATTCCTATGCTCCGTGTCTACAACAACACCGCCCGTTA 209872 Query 111968 TGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 ||| |||| | ||| ||| || || | || |||| || ||||| ||||| Sbjct 209871 TGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCGTGGCA 209812 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| || || | | ||||| || || | ||||| || | ||||||| || || Sbjct 209811 CGCTGACGTCTTTGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG-TG 209753 Query 112085 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 | ||||||||||||| ||| | |||||||| |||||||||||| || | || | |||| Sbjct 209752 CTCGCGATCTCTTCTATGCTTTGTGGATTCCCGATCTCTTCATGCAGCGTGTGCAAGAGA 209693 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | || | ||||| || || || || ||| | || | | || | Sbjct 209692 ACGGCGAGTGGACCCTTATGTGTCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGCG 209633 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGC 112263 | ||||| | ||||| ||| ||||||||| | || |||| | | ||| || | Sbjct 209632 ACGAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGGAGGGTCGTGGTCGCGAGACTGTCC 209573 Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | || | | ||| | || ||||| || |||| || |||||||||| || | Sbjct 209572 GTGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACTGAGACTGGTAACCCCTTC 209514 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| || || ||| ||||| || || ||||| | ||| || Sbjct 209513 ATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCATTCGC 209454 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || || || | || || || ||| | || | || | |||||| ||||| || Sbjct 209453 AGCTCGAATTTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTTGCTGTCTGC 209394 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTA 112501 ||||| || || | ||||| ||| | || || | | | | || | || |||| Sbjct 209393 AACCTTGCCTCCGTTGCTCTGCCCTCCTTCGTCGA-CTACAAGCGTGGAGAGTTCGATTT 209335 Query 112502 TGAAAAACTCCACGAAGTTACG-AAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || || ||||| || | | ||| ||| || || |||| | || || Sbjct 209334 CAAGAAGCTTCACGAGGTCGTGCAGGTCTG-CACTCGCAATCTTAACAAGATCATCGAGG 209276 Query 112561 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620 || || ||||||||| || || || | | ||| | || ||||||| Sbjct 209275 TTAACCACTATCCCGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACAGGCCTATTGGTC 209216 Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 112680 | |||||||||||||| || || | ||| | | |||| | || || || | Sbjct 209215 TTGGTGTCCAAGGTCTTGCTGACGCTTTCCTCGCTCTTCGCTTGCCTTTCGAGTCACCTG 209156 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA 112740 | || ||| | |||| | || || ||||| || |||||||| ||||| | Sbjct 209155 AGGCTAAGAAGCTCAACATCCAGATCTTCGAGACCATTTATCACGCTGCTCTGACCTCTT 209096 Query 112741 GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 112800 || ||| || ||| |||||| || | || | || || || || | ||| | Sbjct 209095 CTTGCGAGACTGCCAAGGAGCTTGGTCCTTACGCTACGTACGAAGGCTCGCCTGTTTCGC 209036 Query 112801 AAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGA 112858 | || ||| || | || ||||||| || | || | || || || ||||||| Sbjct 209035 AGGGCCAGCTGCAGTACGACATGTGGG-GCGTCACCCCCA-CTGATCTCTGGGACTGGGC 208978 Query 112859 CGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAAT 112918 | | || ||||| ||| || | ||| | || ||| ||| | || || || || Sbjct 208977 CTCGCTGAAGGACAAGATCGCCCAGCACGGTGTCCGCAACTCTCTGCTCATTGCGCCCAT 208918 Query 112919 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 112978 ||| || ||||| ||| | || || | ||||| || || ||||| || || ||||| | Sbjct 208917 GCCCACTGCCTCTACCTCCCAGATTCTTGGTAACAACGAGTGCTTCGAGCCTTACACCTC 208858 Query 112979 GAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC---AAGCATCT 113035 |||||||||| | | || || |||||||| | | |||||| | || Sbjct 208857 GAACATCTATTCCCGTCGTGTGCTTGCTGGAGAGTTCCAGGTCGTCAACCCTTGGTTGCT 208798 Query 113036 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAA 113095 | |||| || || || ||||||||| | || | |||||| | | ||| | Sbjct 208797 CAAGGAT---CTTGTCGACATGGGTCTCTGGACAGAGAACATGAAGAACCGCATCATTGC 208741 Query 113096 AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCG 113155 | |||||| ||||| || || | ||||| ||||| || ||| | ||| Sbjct 208740 CGAGGGTGGATCCATCCAGCGCATCCCTAACATTCCTGATGAGATCAAGGTTCTCTACAA 208681 Query 113156 CACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 113215 || || ||||| ||| | | |||| | |||||||| || |||||| ||| Sbjct 208680 GACCGTCTGGGAGATCTCGCAGCGTACCATCATCCAGATGGCCGCTGACCGTGGTGCCTT 208621 Query 113216 CATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTC 113275 |||||| || ||| | |||| | |||| | || || ||| |||| || | Sbjct 208620 CATTGACCAGTCTCAGTCTCTGAACATTCACATGAAGGAGCCTACCATGGGCAAGATCAC 208561 Query 113276 TTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATC 113335 || |||||| | | |||||| || ||||| || || ||||| ||||||||| | Sbjct 208560 ATCCATGCACTTTGCTGGATGGAAGCTTGGCCTCAAGACTGGAATGTACTACCTCCGAAC 208501 Query 113336 TAAGGC 113341 | ||| Sbjct 208500 CATGGC 208495 >seq289 Length=227737 Score = 105 bits (116), Expect = 8e-18 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168 |||||| || || | ||||| || |||||||| || ||| | | |||| | | Sbjct 105670 AGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGATGGATCTCGGACAAGAACTC 105611 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | |||| || | || || |||| || || |||||| || ||||||||| |||| Sbjct 105610 -TACCTTCGCCAACCGCCTTGTCGCTTTCGCTGCTGTTGAAGGCATCTTCTTCAGCGGTT 105552 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 | ||| ||| | || | ||||| |||||||| ||||| ||||| |||||| |||||| Sbjct 105551 CGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTCTCACATTCTCC 105493 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||| |||||||| |||||||| | ||| || ||||| Sbjct 105492 AACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGC 105449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739366121520