Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq308 98.7 8e-15 >seq308 Length=314950 Score = 98.7 bits (108), Expect = 8e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || ||||| || ||||| ||||| || |||||||| | ||| Sbjct 119270 ACAGTTCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCTGGTCTCATT 119329 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || || || ||||| ||||| || || ||||||||||| |||| || || Sbjct 119330 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCCTACGGT 119389 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || | | ||| || | || || |||||||| || | |||||| Sbjct 119390 CTTGACAAGAAGACTGAGGGTGAGCGCAACGTCCTCATCTTCGACTTGGGAGGT 119443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029275322156590