Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq332 214 2e-50 >seq332 Length=679357 Score = 214 bits (236), Expect = 2e-50 Identities = 558/842 (66%), Gaps = 13/842 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| ||||| | ||||||||| ||| |||||||| | Sbjct 210228 CCCGCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATTGAGAAGGC 210169 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | |||||||||||| | ||||| || | ||| |||| ||||| | || || |||| Sbjct 210168 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCGTCGCCGACACTCT 210110 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||| || |||||| || |||||||| |||||||| |||| || ||||||| Sbjct 210109 TCAATGCCGGCACACCATCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 210050 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | |||||||| | || || | | || ||| ||||| ||| |||| Sbjct 210049 ACAGCATTGAGGGTATCTACGACACGCTGAAGACCTGCGCGTTGATCTCCAAGACTGCTG 209990 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGAC 75507 | |||||||| | || |||| | | |||| ||||| ||| | || || Sbjct 209989 GCGGTATTGGCCTCAACGTCCACCGCATTCGTGCCA--CCGGCTCGTACATTGGAGGAAC 209932 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || || |||| | ||| | ||||| ||||| || || | ||| ||| || || || Sbjct 209931 CAACGGAACATCAAACGGTTTGATTCCTATGCTCCGTGTCTACAACAACACCGCCCGTTA 209872 Query 75568 TGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 ||| | | || | ||| ||| || | | || ||||| | || || |||| Sbjct 209871 TGTCGA-CCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCGTGGC 209813 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | || || || | | ||||| || | | ||||| || | || |||| ||| Sbjct 209812 ACGCTGACGTCTTTGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCGTG 209753 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | |||||||| | | |||||||||| || || |||||| |||| || | ||| Sbjct 209752 CTCGCGATCTCTTCTATGCTTTGTGGATTCCCGATCTCTTCATGCAGCGTGTGCAAGAGA 209693 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | ||| | ||||| || || || || ||| | |||| || | Sbjct 209692 ACGGCGAGTGGACCCTTATGTGTCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGCG 209633 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| | ||||| ||| ||||| || |||||||| | | | |||||| | Sbjct 209632 ACGAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGGAGGGTCGTGGTCGCGAGACTGT-C 209574 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | | | || | | ||| | || ||||| | | ||||| |||||||| | || | Sbjct 209573 CGTGCTCAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACTGAGACTGGTAACCCCTTC 209514 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| |||||||||||| |||| |||||| ||||| ||||| | || || || Sbjct 209513 ATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCATTCGC 209454 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 ||||| ||| | ||||| || || | |||||||| | |||||| ||||| ||| Sbjct 209453 AGCTCGAATTTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTTGCTGTCTGC 209394 Query 76043 AA 76044 || Sbjct 209393 AA 209392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566684266080