Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq248 150 1e-31 >seq248 Length=151005 Score = 150 bits (166), Expect = 1e-31 Identities = 244/344 (71%), Gaps = 14/344 (4%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 ||| ||||||||| ||||| | || | | || | ||||||||| |||||| |||| Sbjct 24208 TGACCTCAGTCTCAGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGGAGATGAAGCCAT 24149 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 |||| ||||| | ||| || ||||| | ||||||| ||| | || |||| | Sbjct 24148 CAAGGTAATCCTGGAGCTTGTTGGCATCGTGAGCACCGTTGATGATCCAGCGGTCGTCGT 24089 Query 34433 TGTAATCGACCTGCGTT----TGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGT 34486 || | | || ||| || || || |||||| | ||||||||||| || || | Sbjct 24088 TGG----GGCTTGTGTTGGTCTGAGCACCGAGCTCGAAACCGAAGTACTTGATGACGTG- 24034 Query 34487 AAATGGCCGGACGT-CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTG 34545 | ||| ||||| ||||| | ||||||| || || ||||||||||||||||||| Sbjct 24033 AGCTGGA-GGACGAGCCAAG-GAGTTGGCGACACTGGTCAGGTTGACGATGACAGTCTTG 23976 Query 34546 ATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605 |||||||| ||||| ||||||| ||||| || |||| ||| |||||||||||||| Sbjct 23975 ATGCCGTTACCCTTGCCTTCGATCTTGGACTGGAGGCGCTCCATCTTGTAGCGGTAGAAG 23916 Query 34606 GCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 | ||| | |||| |||| || ||| || || |||| || || Sbjct 23915 GGGTCGGTGACATCGCGGCGAATGTTGACGGTGGCCATGGTTGC 23872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839632680763