Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq332 327 1e-84 seq289 136 4e-27 seq308 125 7e-24 seq306 84.2 2e-11 >seq332 Length=679357 Score = 327 bits (362), Expect = 1e-84 Identities = 1144/1753 (65%), Gaps = 67/1753 (4%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| |||||||||||| || ||||||||||||||||| | |||| || |||| Sbjct 208603 GACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGGATGATGGTACGCTG- 208661 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || |||||| | ||| |||||| |||| Sbjct 208662 --CGAGATCTCCCAGACGGTCTTGTAGAGAACCTTGATCTCATCAGGAATGTTAGGGATG 208719 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||||| | || || | | |||| || | || ||| | || || | || Sbjct 208720 CGCTGGATGGATCCACCCTCGGCAATGATGCGGTTCTTCATGTTCTCTGTCCAGAGACCC 208779 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || || | || || | | || || ||||| ||||| || || ||||| Sbjct 208780 ATGTCGACAAGATCCTTGAGCAACCAAGGGTTGACGACCTGGAACTCTCCAGCAAGCACA 208839 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || ||| | ||| || | || || || |||||||||| || | |||||| Sbjct 208840 CGACGGGAATAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGTTACCAAGAATCTGG 208899 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || ||||||||| ||| | ||||| |||||||| | |||| | | Sbjct 208900 GAGGTAGAGGCAGTGGGCATGGGCGCAATGAGCAGAGAGTTGCGGACACCGTGCTGGGCG 208959 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| |||||| | |||||||||||||| | || || ||| |||||||||| Sbjct 208960 ATCTTGTCCTTCAGCGAGGCCCAGTCCCAGAGATCAGTGGGGGTGACGCCCCACATGTCG 209019 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACG-AGCTGTACGGTCCGTGCGC 148528 |||||||| ||| | | | || ||| ||||||| ||| ||| || || || | Sbjct 209020 TACTGCAGCTGGCCCTGCGAAACAGGCGAGCCTTCGTACGTAGC-GTAAGGACCAAGCTC 209078 Query 148529 CGCCGCCAGT-TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | || ||| ||||| | || || ||| ||||| |||||| || || Sbjct 209079 CTTGGC-AGTCTCGCAAGAAGAGGTCAGAGCAGCGTGATAAATGGTCTCGAAGATCTGGA 209137 Query 148588 TGTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGT 148644 |||||||| | ||| || | ||| | |||| || || | || |||| Sbjct 209138 TGTTGAGCTTCTTAGCC---TCAGGTGACTCGAAAGGCAAGCGAAGAGCGAGGAAAGCGT 209194 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| || || || || | ||||| |||| ||| | |||| | |||| || Sbjct 209195 CAGCAAGACCTTGGACACCAAGACCAATAGGCCTGTGACGGAAGTTGCTGCGGCGTGCCT 209254 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGC------ACCACCA 148758 ||| | ||||||||||| ||||||||||||| ||||||||| ||| || Sbjct 209255 CCTCAACGGGATAGTGGTTAACCTCGATGATCTTGTTAAGATTGCGAGTGCAGACCTGCA 209314 Query 148759 C--CTTTGTAATTCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTACGATGCATCG 148813 | | | || | || | || || || || ||||| || |||| | | | Sbjct 209315 CGACCTCGTGAAGCTTCTTG--AAATCGAACTCTCCACGCTTGTAGTCGACGAAGGAGGG 209372 Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 || || | ||||| || ||||| || || |||||| || ||| ||||||| | Sbjct 209373 ---CAGAGCAACGGAGGCAAGGTTGCAGACAGCAACCTCATCAGGCGCGGTGTACTCGAT 209429 Query 148874 GATCTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTT 148930 |||||| | ||||| ||| ||||| || | || | |||||| || |||||||| Sbjct 209430 GATCTCAGTGCACAAATTCGAGCTGCGAATGGTACCG---AGGTTCTTCTGGTTGCTCTT 209486 Query 148931 GCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCAC 148990 |||||| || |||||||| |||||| | || ||||| || ||| | || | Sbjct 209487 CCTGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAG 209546 Query 148991 TATGAACCGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTC 149047 ||| || ||| | ||| || || || || | || |||||||||| ||| Sbjct 209547 AATGG--CGTACCAGAGCTTCTGAGCACGGACAGTCT-CGCGACCACGACCCTCCTTCTC 209603 Query 149048 GTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCAC 149105 ||| | ||| | || | |||| | ||||||||| || |||| || |||||| Sbjct 209604 GTACTTCTCGTAAAGGGCAAC--GAACTCGTCGCCGTAGACGTCAGCGAGGCCAGGGCAC 209661 Query 149106 TTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCG 149165 | || || ||||| || | |||| |||||| | | | ||| |||| ||| || |||||| Sbjct 209662 TCGTTGGGACACATAAGGGTCCACTCGCCGTTCTCTTGCACACGCTGCATGAAGAGATCG 209721 Query 149166 GGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGG 149225 || | ||| | || || | ||| ||||| || || || ||| ||| Sbjct 209722 GGAATCCACAAAGCATAGAAGAGATCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTC 209781 Query 149226 CGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCG 149285 | ||||| ||| | || || | ||| |||||||||||||| | ||| | || | || Sbjct 209782 CTCAGGTCGAGGAAGCCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCA 209841 Query 149286 CCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACC 149342 || |||| ||||| ||||||||||| | || | ||||||| | || || | | Sbjct 209842 CCAGGGCGCTTGTTGCCACCCTGGTCGACATAACGGGCGGTGTTGTTGTAGACACGGAGC 209901 Query 149343 ATAGG-TTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCT 149399 ||||| |||| || | | || ||||| || | |||| ||| |||| || Sbjct 209902 ATAGGAATCAA-ACCGTTTGATGTTCCGTTGGTTCCTCCAATGTACGA--GCCGGTGGCA 209958 Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GT 149457 || | ||| ||||||| ||| || ||||| || || ||| ||||| |||||| || Sbjct 209959 CGAATGCGGTGGACGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCAACGCGCAGGT 210017 Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517 | | ||||| |||||| ||||| |||||||| ||||||| | || ||||| | Sbjct 210018 CTTC-AGCGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGG 210076 Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577 | |||| || || | | |||||||| ||| | || || |||||||| || | Sbjct 210077 ATGACATCTGTGGGGATGGTGTGCCGGCATTGAAGAGTGTCGGCGACGCGTGTGTGAAGT 210136 Query 149578 ATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637 | ||||| ||| ||||| | ||||| | || ||||| || ||||||| Sbjct 210137 ACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATGC 210196 Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTT 149694 | | ||||| ||||| ||||| |||||||| ||||| || || ||| ||| || Sbjct 210197 CAACAGCGACACGCATGAGCATGTGCTGCGGGCGCTCGGCAACCTTG---CCATTGATGC 210253 Query 149695 TGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGC 149754 ||||| || | || || |||||| |||| ||| ||| ||||| ||||| ||| Sbjct 210254 GGAGCAGATATGAGCGCTCCAGGGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCACGGT 210313 Query 149755 CGTGGTCAATGGC 149767 ||| | | ||||| Sbjct 210314 CGTAGACGATGGC 210326 >seq289 Length=227737 Score = 136 bits (150), Expect = 4e-27 Identities = 344/521 (66%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || ||||| ||||| || ||||| || ||||| | | || ||||| | Sbjct 105157 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGAGAGATGTTCTC 105216 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| ||| || || | ||| | | ||||| Sbjct 105217 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTGCTTGGGGTTGCCGAGGGCCAGCAGCAG 105276 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || ||||||||||||| ||||||| ||| | ||||||||||| |||| | Sbjct 105277 GCGGTCGGCGACGAACTCAATGTACTGGCACATGAGACCG-GCGTTCATGCCGAGCAGGG 105335 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | |||| || | || ||||||| ||| || || ||||| ||| |||| Sbjct 105336 CACAAGGCAGGGCATCGGACAAGAACTCCTGCTCGATTGTAACGGCCTCGGTGATGATGG 105395 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC-------GGTAGTACAGG 120642 | || | | ||| || | || | | |||| | || ||| Sbjct 105396 C--------TGCGAC--GGCCTCCTTGCTTGGGCGGTTGTTCAGCAAAGAGAAGAGAAGG 105445 Query 120643 CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGG 120702 || |||||||| ||||||| |||||||||||| || || ||||||||| || || || Sbjct 105446 CAAGCAAAGTCGGTGTGCATGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAATGTGAGA 105505 Query 120703 CCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAAC 120762 |||||||| | || | |||| | |||| |||| || || || ||||| Sbjct 105506 CCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGAACCGCTGAAGAAG 105565 Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822 | ||| || || || || ||||| | ||| | ||| || || | ||||| | Sbjct 105566 ATGCCTTCAACAGCAGCGAAAGCGACAAGGCGGTTGGCGAAGGTAGAGTTCTTGTCCGAG 105625 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||||| || |||||| || ||||| ||||| | ||| || Sbjct 105626 ATCCATCGCAGGGCCCAATCAGCCTTCTTGCGGATGCAGGG 105666 >seq308 Length=314950 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | |||| |||||| |||||||| || Sbjct 275415 GTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCAAGCTGCTTTCCT 275474 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||| || |||||||| |||||| |||| Sbjct 275475 GCGAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 275534 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || || | |||| ||| |||||||| || || Sbjct 275535 ACATTGTCGATTGTGTCGCTAGACTCAACCTCCAATGTGATGGTCTTGCCGGTGAGTGTC 275594 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 275595 TTGACGAAAATCTGCAT 275611 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||||||||| ||||| || ||||| ||| | ||| ||| |||||||| Sbjct 275634 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAA--GTGTACGGCCGTCCTCGA 275691 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || ||| | ||||| ||||||||||| ||||||||||| ||||| || | Sbjct 275692 GCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAA 275751 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||| | | ||| || || | |||| || |||| Sbjct 275752 TCTTCGACTTCACGTTATCGATTGTGTCCGACGACTCAACCTCAAGTGTGATAGTCTTGC 275811 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || ||||| |||||||| Sbjct 275812 CAGTCAAGGTCTTGACGAAGATCTGCAT 275839 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| ||| | ||||||||||||||||| Sbjct 276153 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 276211 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 276212 GGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 276271 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || || | | |||||| || | ||||| || || ||||| Sbjct 276272 GACGTTGTCGATGGTATCCGAAGACTCCACCTCAAGGGTGATCGTCTTACCGGT 276325 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| | ||| | | | || || |||||||| || Sbjct 275871 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCAAGCTGCTTACC 275929 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || || || |||||||| |||||| ||| Sbjct 275930 AGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTT 275989 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | ||||||| | ||| || |||| |||| ||| || ||||||| Sbjct 275990 CACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCA 276045 >seq306 Length=305464 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||||||||||||||| Sbjct 48693 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCA-TCCTCGAGCTGCTTGCC 48635 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | ||||| ||||||||||| || || ||||| |||||||| Sbjct 48634 GGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 48590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418437280840